PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022729324.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family C3H
Protein Properties Length: 363aa    MW: 39195.1 Da    PI: 9.3856
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022729324.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH39.68.8e-13327126
                    --S---SGGGGTS--TTTTT-SS-SS CS
         zf-CCCH  1 yktelCrffartGtCkyGdrCkFaHg 26
                    yk e+Cr+f+r G C+yG+rCkF H+
  XP_022729324.1  3 YKKEPCRNFQR-GSCQYGERCKFLHV 27
                    9**********.*************6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 363 aa     Download sequence    
MHYKKEPCRN FQRGSCQYGE RCKFLHVIQQ QPKSNSFGFG TQAISHQQQK PNPFGFGVQN  60
NAQPKAANDF GNKQNHVKNT WTRSSASSGA PSLRQPDNQP QATNHNSPCD IVGDVSQEEL  120
RAAAYDDAKH GLSLQSIVDR ERNLLNSKLI EIENFLRNPY KGPVGSTLAQ QIPFPRAMAT  180
VFSPTAQNSA TQTNFPPSVS SFSQLGASLY TGFPVRSSVQ SNNAFGQPIS FSNSAQSSSV  240
FVTGNVPSAN AFSFGSQQSN QSVAASSTTN TASFTNSSIT STAHKQFSAV AVSTQNFSSS  300
SFQPPALFDV SISNSKADGQ ATKDVQLGNN LLRKIVSGDS SIWLKEKWIP GEIPEEAPPD  360
AYV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75340.11e-44C3H family protein