PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022729322.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family C3H
Protein Properties Length: 395aa    MW: 43175.7 Da    PI: 8.8393
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022729322.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH39.49.8e-13327126
                    --S---SGGGGTS--TTTTT-SS-SS CS
         zf-CCCH  1 yktelCrffartGtCkyGdrCkFaHg 26
                    yk e+Cr+f+r G C+yG+rCkF H+
  XP_022729322.1  3 YKKEPCRNFQR-GSCQYGERCKFLHV 27
                    9**********.*************6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 395 aa     Download sequence    
MHYKKEPCRN FQRGSCQYGE RCKFLHVIQQ QPKSNSFGFG TQAISHQQQK PNPFGFGVQN  60
NAQPKAANDF GNKQNHVKNT WTRSSASSGA PSLRQPDNQP QATNHKCTDP ESCKRIILED  120
FEHEKPLWKF TCYSHWKNSP CDIVGDVSQE ELRAAAYDDA KHGLSLQSIV DRERNLLNSK  180
LIEIENFLRN PYKGPVGSTL AQQIPFPRAM ATVFSPTAQN SATQTNFPPS VSSFSQLGAS  240
LYTGFPVRSS VQSNNAFGQP ISFSNSAQSS SVFVTGNVPS ANAFSFGSQQ SNQSVAASST  300
TNTASFTNSS ITSTAHKQFS AVAVSTQNFS SSSFQPPALF DVSISNSKAD GQATKDVQLG  360
NNLLRKIVSG DSSIWLKEKW IPGEIPEEAP PDAYV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75340.11e-72C3H family protein