PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022728971.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

bHLH

Protein Properties

Length: 562aa MW: 61385 Da PI: 9.2549

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022728971.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	54.5	2.2e-17	261	310	2	55
HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 r +h++ E+rRR++iN++f+ Lr+++P++ ++K +Ka+ L ++veYI+ Lq XP_022728971.1 261 RSKHSATEQRRRSKINDRFQMLRDVIPHS----DQKRDKASFLLEVVEYIQFLQ 310 889***********************9....9*****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 562 aa Download sequence
MELPQPRPFG AEERKPTHDF LSLYSHPSVQ QDPSPPSQGG YLKTHDFLQL ERLGKASAKE 60 ETPVKVATSE KPPTPSPPPS VEQILPGGIG TYSISHISYF NPRVPKTEGA VFTAAEGSST 120 ERNDENSNCS SYNGSGFTLW EESAGKKGNT GKQNAGATPV VKEAAGQWAT SSLERASQSS 180 TNNHRNSFSS LSSSQPSSKQ KSQSFMEMIK SAKDSSHDDD FEEAENFVLK KESSATTYSK 240 GELGVKVDGK STPDQKANTP RSKHSATEQR RRSKINDRFQ MLRDVIPHSD QKRDKASFLL 300 EVVEYIQFLQ EKVHKYEGTY QGWSHKPSKL MPWRNNNMPT ENYADQSRAK NGLSAPAVVF 360 SAKLEDKNIT VTPTIPGISA KNPIESDMST ATTFRAIDLY PGMMNKTTPF PVSLQPNFFT 420 SAQSTGLATQ LQPRLPSDAE NSSSQPQSVL CHAGSCTTNG AVPSEKPKEQ ELTVEGGNFS 480 ISSIYSRGLL NTLTQALQTS GVDLSRATIS VQIELGKQSS NSPTASTSTL KDREAPSTNQ 540 RTTRRRVGRG EDSDHPLKKL KT

Sequence ? help Back to Top

Protein Sequence Length: 562 aa Download sequence

MELPQPRPFG AEERKPTHDF LSLYSHPSVQ QDPSPPSQGG YLKTHDFLQL ERLGKASAKE  60
ETPVKVATSE KPPTPSPPPS VEQILPGGIG TYSISHISYF NPRVPKTEGA VFTAAEGSST  120
ERNDENSNCS SYNGSGFTLW EESAGKKGNT GKQNAGATPV VKEAAGQWAT SSLERASQSS  180
TNNHRNSFSS LSSSQPSSKQ KSQSFMEMIK SAKDSSHDDD FEEAENFVLK KESSATTYSK  240
GELGVKVDGK STPDQKANTP RSKHSATEQR RRSKINDRFQ MLRDVIPHSD QKRDKASFLL  300
EVVEYIQFLQ EKVHKYEGTY QGWSHKPSKL MPWRNNNMPT ENYADQSRAK NGLSAPAVVF  360
SAKLEDKNIT VTPTIPGISA KNPIESDMST ATTFRAIDLY PGMMNKTTPF PVSLQPNFFT  420
SAQSTGLATQ LQPRLPSDAE NSSSQPQSVL CHAGSCTTNG AVPSEKPKEQ ELTVEGGNFS  480
ISSIYSRGLL NTLTQALQTS GVDLSRATIS VQIELGKQSS NSPTASTSTL KDREAPSTNQ  540
RTTRRRVGRG EDSDHPLKKL KT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G08130.2	1e-120	bHLH family protein