PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022728917.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

ARF

Protein Properties

Length: 798aa MW: 87974.2 Da PI: 6.6429

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022728917.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	78.7	5.9e-25	164	265	1	99
EEEE-..-HHHHTT-EE--HHH.HTT.....---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.....ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsef 90 f+k+lt sd++++g +++p++ ae++ ++++ s++l+ +d++g +W++++iyr++++r++lt+GW+ Fv++++L +gD v+F+ + +++ XP_022728917.1 164 FCKTLTASDTSTHGGFSVPRRAAEDCfppldYKQTRPSQELVAKDLHGVEWRFRHIYRGQPRRHLLTTGWSIFVSQKNLVAGDAVLFM--RGEDG 256 99**************************8444556789********************************************..44999 PP ..EEEEE-S CS B3 91 elvvkvfrk 99 el+++++r+ XP_022728917.1 257 ELRLGIRRA 265 9***996 PP
2	Auxin_resp	120.1	1.7e-39	290	371	1	82
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsL 82 +a+a+stks+F+++Y+Pras++eFv++++k+ k ++++v+ G+Rfkm+fe +ds+err+sG+v+g+ d+dp+rWp+SkWr+L XP_022728917.1 290 VANAISTKSMFHIFYSPRASHAEFVIPFQKYTKCVTNPVCTGTRFKMRFEIDDSPERRCSGVVTGIGDSDPYRWPDSKWRCL 371 689******************************************************************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 798 aa Download sequence
MEIDLNHAVN EVEKAAICNG DCDKASACVY CLSSSSSSNS ASPPCSTSIY LELWHACAGP 60 LTSLPKKGNV VVYFPQGHLE QVASASPFSP LEMPTFDLPP QIFCEVVNVQ LLANKENDEV 120 YTQVTLLPQP ELGGPNLEGK QLDEQGVGEG GGGGSPTKST PHMFCKTLTA SDTSTHGGFS 180 VPRRAAEDCF PPLDYKQTRP SQELVAKDLH GVEWRFRHIY RGQPRRHLLT TGWSIFVSQK 240 NLVAGDAVLF MRGEDGELRL GIRRAVRPRN GLPDSVITKQ NSYPNVLSAV ANAISTKSMF 300 HIFYSPRASH AEFVIPFQKY TKCVTNPVCT GTRFKMRFEI DDSPERRCSG VVTGIGDSDP 360 YRWPDSKWRC LMVRWDENIV SDHQERVSPW EIDPSVSLPL LSIQSSPRLK KLQTGLQAAA 420 LETPITGRGG FLDFEESLRS SKVLQGQENV GFVSPLYGCD TVNRPLDFEM QSSAHQNLAL 480 TGSGKTNISE FTRTRSTAYT GFAESNRFPK VLQGQEICPL KSLAQKADNN PGVWAKTNLG 540 CNSFNVHQAP KTNCYTLASE GLRNMYFPYS DFYKAGPDPT MSSYASPLPR GNVSFNASSI 600 KTGVIVDGVR KPNTLNEHKP LENISSPAFR KNLRNQQDDC FKGNVAGCKL FGFSLTADSL 660 TPNSQNSGKR SCTKVHKQGS LVGRAIDLSR LYGYDDLMTE LERLFSMEGL LRDPDKGWRV 720 LYTDSENDVM VVGDDPWHEF CDVVSKIHIY TQEEVEKMTI GMASDDTQSC LEQAPVIMEA 780 SKSSSVGQPD SSPTVIRV

Sequence ? help Back to Top

Protein Sequence Length: 798 aa Download sequence

MEIDLNHAVN EVEKAAICNG DCDKASACVY CLSSSSSSNS ASPPCSTSIY LELWHACAGP  60
LTSLPKKGNV VVYFPQGHLE QVASASPFSP LEMPTFDLPP QIFCEVVNVQ LLANKENDEV  120
YTQVTLLPQP ELGGPNLEGK QLDEQGVGEG GGGGSPTKST PHMFCKTLTA SDTSTHGGFS  180
VPRRAAEDCF PPLDYKQTRP SQELVAKDLH GVEWRFRHIY RGQPRRHLLT TGWSIFVSQK  240
NLVAGDAVLF MRGEDGELRL GIRRAVRPRN GLPDSVITKQ NSYPNVLSAV ANAISTKSMF  300
HIFYSPRASH AEFVIPFQKY TKCVTNPVCT GTRFKMRFEI DDSPERRCSG VVTGIGDSDP  360
YRWPDSKWRC LMVRWDENIV SDHQERVSPW EIDPSVSLPL LSIQSSPRLK KLQTGLQAAA  420
LETPITGRGG FLDFEESLRS SKVLQGQENV GFVSPLYGCD TVNRPLDFEM QSSAHQNLAL  480
TGSGKTNISE FTRTRSTAYT GFAESNRFPK VLQGQEICPL KSLAQKADNN PGVWAKTNLG  540
CNSFNVHQAP KTNCYTLASE GLRNMYFPYS DFYKAGPDPT MSSYASPLPR GNVSFNASSI  600
KTGVIVDGVR KPNTLNEHKP LENISSPAFR KNLRNQQDDC FKGNVAGCKL FGFSLTADSL  660
TPNSQNSGKR SCTKVHKQGS LVGRAIDLSR LYGYDDLMTE LERLFSMEGL LRDPDKGWRV  720
LYTDSENDVM VVGDDPWHEF CDVVSKIHIY TQEEVEKMTI GMASDDTQSC LEQAPVIMEA  780
SKSSSVGQPD SSPTVIRV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G60450.1	0.0	ARF family protein