PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022728778.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

SBP

Protein Properties

Length: 560aa MW: 60933.8 Da PI: 7.6102

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022728778.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	134.3	3.9e-42	176	251	2	77
-SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S-- CS SBP 2 CqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkq 77 Cqv gC++dl++ k+yh+rhkvCevhsk+++v+v+g+eqrfCqqCsrfh l efD++krsCr+rLa+hnerrrk+q XP_022728778.1 176 CQVYGCNKDLTSSKDYHKRHKVCEVHSKTAKVIVNGIEQRFCQQCSRFHLLAEFDDGKRSCRKRLAGHNERRRKPQ 251 **************************************************************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 560 aa Download sequence
MESWSFVSGE KESVYDAAIS PSDSYARNRN AFINWELKGP YSFNNNMLVS GQQAIKNHAL 60 GELGYGELIG KQLPNDSIGD VLSSKISGGR ALNPIMATLN AFSGDDESTL KLSSSVVDSK 120 SWDSSLIDLK LGRFHDHRDG QNSSFAIGAP VLSSSESSTP PKRVRAAREN SHTAYCQVYG 180 CNKDLTSSKD YHKRHKVCEV HSKTAKVIVN GIEQRFCQQC SRFHLLAEFD DGKRSCRKRL 240 AGHNERRRKP QVGIHSGSAG RLLLQYNGFA GGRFHGPMLA TTSFICQDIL PSGLLHVEKY 300 VTNEWGKRIK VEDGTNYSSL SAIPTTNGHF HLKAPYPPSG IENLLPSFHD NGANTATGGI 360 LGENNARYAH DFGGRNSGSR PLFQDTSLGS EDINVFNAAS TIQGLSGISD SACALSLLSS 420 QSQNSSSHSS GIPMARSLVV PGNHTHYNMS QVSEKLIRVN SQASTTGVSN KFSSTGMNSI 480 EGSHLGALLV SDGREAAKFD ITDGIYQGSE FMNTKDCLSC EDGPMIDLLQ LSSQLQQVEH 540 QRQSMQVKQE NEAFCCFRIT

Sequence ? help Back to Top

Protein Sequence Length: 560 aa Download sequence

MESWSFVSGE KESVYDAAIS PSDSYARNRN AFINWELKGP YSFNNNMLVS GQQAIKNHAL  60
GELGYGELIG KQLPNDSIGD VLSSKISGGR ALNPIMATLN AFSGDDESTL KLSSSVVDSK  120
SWDSSLIDLK LGRFHDHRDG QNSSFAIGAP VLSSSESSTP PKRVRAAREN SHTAYCQVYG  180
CNKDLTSSKD YHKRHKVCEV HSKTAKVIVN GIEQRFCQQC SRFHLLAEFD DGKRSCRKRL  240
AGHNERRRKP QVGIHSGSAG RLLLQYNGFA GGRFHGPMLA TTSFICQDIL PSGLLHVEKY  300
VTNEWGKRIK VEDGTNYSSL SAIPTTNGHF HLKAPYPPSG IENLLPSFHD NGANTATGGI  360
LGENNARYAH DFGGRNSGSR PLFQDTSLGS EDINVFNAAS TIQGLSGISD SACALSLLSS  420
QSQNSSSHSS GIPMARSLVV PGNHTHYNMS QVSEKLIRVN SQASTTGVSN KFSSTGMNSI  480
EGSHLGALLV SDGREAAKFD ITDGIYQGSE FMNTKDCLSC EDGPMIDLLQ LSSQLQQVEH  540
QRQSMQVKQE NEAFCCFRIT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69170.1	1e-49	SBP family protein