PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022728742.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

C2H2

Protein Properties

Length: 418aa MW: 47482.2 Da PI: 6.8334

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022728742.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	17	1.7e-05	111	133	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C +C+ sFs+ +L +H+r+H XP_022728742.1 111 FACFICDDSFSTMKLLCQHMRNH 133 78********************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 418 aa Download sequence
MYHRQEDELD PTDWSETESM AMVPADASLD FLAQKLNTKE IKLTEKGDEA LHQYQDSRTR 60 YCGREFNSDK DLGGHLRIHS QHKAKSKAGI HHMKSTKLSR KHSPQEEDDS FACFICDDSF 120 STMKLLCQHM RNHREMDSNC IQQPIPSQES NSLSEPETAK AEEGIDTISP RNDLHQGSSI 180 DLLKDIPSWS QTGKRGRKRT VSDKIDNIIY HAVPLRVYYG LAVPLTERRL EDSKDINQSL 240 FTRKKQKTEE TMSYQDALME SEVGAAADSE STLDLLGNST EKTSMMPQGF ENHVSNKFKS 300 SSSQRRLKNP KRAKAVKSVH QCEICGKIFQ TGQALGGHKT YHRVKPVVDP LRVELVKRKA 360 KEELSEESGQ VREYITRMLL PGVLSAGEAD SSEESYQERP KRFVDFDLNI PYEGQISA

Sequence ? help Back to Top

Protein Sequence Length: 418 aa Download sequence

MYHRQEDELD PTDWSETESM AMVPADASLD FLAQKLNTKE IKLTEKGDEA LHQYQDSRTR  60
YCGREFNSDK DLGGHLRIHS QHKAKSKAGI HHMKSTKLSR KHSPQEEDDS FACFICDDSF  120
STMKLLCQHM RNHREMDSNC IQQPIPSQES NSLSEPETAK AEEGIDTISP RNDLHQGSSI  180
DLLKDIPSWS QTGKRGRKRT VSDKIDNIIY HAVPLRVYYG LAVPLTERRL EDSKDINQSL  240
FTRKKQKTEE TMSYQDALME SEVGAAADSE STLDLLGNST EKTSMMPQGF ENHVSNKFKS  300
SSSQRRLKNP KRAKAVKSVH QCEICGKIFQ TGQALGGHKT YHRVKPVVDP LRVELVKRKA  360
KEELSEESGQ VREYITRMLL PGVLSAGEAD SSEESYQERP KRFVDFDLNI PYEGQISA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G04390.1	8e-08	C2H2 family protein