PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022728713.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

Protein Properties

Length: 549aa MW: 62417.6 Da PI: 9.9882

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022728713.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	54.6	2e-17	351	440	1	98
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 f+k +++s+v + +l lp kf+e+h +k e +++lede+g +++ + +k+ + l++GW+ F+ +++L++gD +vF+l++ ++f ++ XP_022728713.1 351 FVKSMVRSHVYSCFWLGLPSKFCEDHLSKMVE--DMVLEDENGSEYDAIY--IGKRAG--LSGGWRTFALDHKLDDGDALVFELIQPTRF--KIY 437 89**********************555445..7***********..555544..9**********************97777..776 PP EE- CS B3 96 vfr 98 ++r XP_022728713.1 438 IIR 440 666 PP

Sequence ? help Back to Top
Protein Sequence Length: 549 aa Download sequence
MIECRNFPSL QFVIFLWSLS GSVSGLSATR VQRLNKTSLS SIYSIQLYIS TLLLYIYITK 60 GGQGKKKSQI NARYKETGSV KYSNYPVISP VQQTVKVSRL LYQMFYYKFS ILEQDCVVES 120 RELHLDLMWG INGLNILIES ETSGVSWPRP FGFSIKFRMK TTLSNICITP QIQVNDGRFI 180 FISLLVELGI SEISTSLAQL SNSHNKSQSQ QRLYKPRLKP KSTRTFEQLR RSSRARNPVP 240 SYCDDVNTCD VLQKKYSSRI KQRCDDCIWF LPDTVDSNSV ITFKTYLYYT ITVDIDLPSL 300 RKRSRSNSSS WASYLARPLD EVKTASYEER VKAIKAAEDL QNSLQSGNPS FVKSMVRSHV 360 YSCFWLGLPS KFCEDHLSKM VEDMVLEDEN GSEYDAIYIG KRAGLSGGWR TFALDHKLDD 420 GDALVFELIQ PTRFKIYIIR VSSILSQGCE EDVADKGLTS CIKSRTRGSM KLDSISSKQN 480 CLSISQELKI KNATDNERKY FDVSQKLKRK GKATTVSKSS KEELAKDGGK FASSKPRKKP 540 APRLSRSRV

Sequence ? help Back to Top

Protein Sequence Length: 549 aa Download sequence

MIECRNFPSL QFVIFLWSLS GSVSGLSATR VQRLNKTSLS SIYSIQLYIS TLLLYIYITK  60
GGQGKKKSQI NARYKETGSV KYSNYPVISP VQQTVKVSRL LYQMFYYKFS ILEQDCVVES  120
RELHLDLMWG INGLNILIES ETSGVSWPRP FGFSIKFRMK TTLSNICITP QIQVNDGRFI  180
FISLLVELGI SEISTSLAQL SNSHNKSQSQ QRLYKPRLKP KSTRTFEQLR RSSRARNPVP  240
SYCDDVNTCD VLQKKYSSRI KQRCDDCIWF LPDTVDSNSV ITFKTYLYYT ITVDIDLPSL  300
RKRSRSNSSS WASYLARPLD EVKTASYEER VKAIKAAEDL QNSLQSGNPS FVKSMVRSHV  360
YSCFWLGLPS KFCEDHLSKM VEDMVLEDEN GSEYDAIYIG KRAGLSGGWR TFALDHKLDD  420
GDALVFELIQ PTRFKIYIIR VSSILSQGCE EDVADKGLTS CIKSRTRGSM KLDSISSKQN  480
CLSISQELKI KNATDNERKY FDVSQKLKRK GKATTVSKSS KEELAKDGGK FASSKPRKKP  540
APRLSRSRV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G58280.1	3e-53	B3 family protein