PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022728582.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

C2H2

Protein Properties

Length: 514aa MW: 56865.7 Da PI: 8.5924

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022728582.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	13.1	0.0003	99	118	2	21
EETTTTEEESSHHHHHHHHH CS zf-C2H2 2 kCpdCgksFsrksnLkrHir 21 +C+ Cgk+F ++ L H++ XP_022728582.1 99 VCKECGKRFQSWKALFGHMK 118 6******************7 PP
2	zf-C2H2	11.7	0.00078	430	452	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++Cp+C k+F++ L H r+H XP_022728582.1 430 HECPICLKVFPSGQALGGHKRSH 452 79******************999 PP

Sequence ? help Back to Top
Protein Sequence Length: 514 aa Download sequence
MEEVQEFKHV CKFCSKSFPC GRSLGGHMRS HMTNNNNSAE TDDKLSKKKL VSVNNVGNDA 60 NTETGMEAGI NGGYILRENP KKTWRLADSS EANSVHDKVC KECGKRFQSW KALFGHMKCH 120 SEKERASNNS LEEQDSWTSG NQKLVMDSQS DNETAAPSKR RRSERRTRYM GTANSSTFSL 180 TNHVSSSMSE IEQEQEEVAL SLVMLSRDVG HWAGLNSVAE SSGNNSVFLE AKIEIKASIR 240 NGKETRKLKK QKEKKLESAT VDSETFQTGA GQPEFCASGL SKTGVIRVNL VKQTGVDRAQ 300 LGSNKLNSSK RKLQESYDPE LKSGSVNKLT NDVLDTEFCK DPRKRSKFEC TTCNKVFHSY 360 QALGGHRASH KKINGCFASR IDSSENSIET ENSPNPTVKS IGNETPIAHL ATDTDDKAEM 420 SYGVKKSKGH ECPICLKVFP SGQALGGHKR SHLVAEAKEN QTIVIQKPIP EIRDFLDLNL 480 PAPVEEETSV HVGFKPWWVG SSHKHEALVG LISN

Sequence ? help Back to Top

Protein Sequence Length: 514 aa Download sequence

MEEVQEFKHV CKFCSKSFPC GRSLGGHMRS HMTNNNNSAE TDDKLSKKKL VSVNNVGNDA  60
NTETGMEAGI NGGYILRENP KKTWRLADSS EANSVHDKVC KECGKRFQSW KALFGHMKCH  120
SEKERASNNS LEEQDSWTSG NQKLVMDSQS DNETAAPSKR RRSERRTRYM GTANSSTFSL  180
TNHVSSSMSE IEQEQEEVAL SLVMLSRDVG HWAGLNSVAE SSGNNSVFLE AKIEIKASIR  240
NGKETRKLKK QKEKKLESAT VDSETFQTGA GQPEFCASGL SKTGVIRVNL VKQTGVDRAQ  300
LGSNKLNSSK RKLQESYDPE LKSGSVNKLT NDVLDTEFCK DPRKRSKFEC TTCNKVFHSY  360
QALGGHRASH KKINGCFASR IDSSENSIET ENSPNPTVKS IGNETPIAHL ATDTDDKAEM  420
SYGVKKSKGH ECPICLKVFP SGQALGGHKR SHLVAEAKEN QTIVIQKPIP EIRDFLDLNL  480
PAPVEEETSV HVGFKPWWVG SSHKHEALVG LISN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G26610.1	6e-35	C2H2 family protein