PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022728295.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

C2H2

Protein Properties

Length: 506aa MW: 56005.1 Da PI: 6.6303

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022728295.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	21.1	8.4e-07	262	283	2	23
EETTTTEEESSHHHHHHHHHHT CS zf-C2H2 2 kCpdCgksFsrksnLkrHirtH 23 C++Cgk F+r nL+ H+r H XP_022728295.1 262 FCTICGKGFKRDANLRMHMRGH 283 6*******************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 506 aa Download sequence
MDLTERLSGE LQKKIPEHPL FTNSNTQHQQ RSEDPSILDY STRIEPPFQA FNQISQKKPS 60 LLCNPNNQIK DPVQDGPVNE SLQASKVQDW DPSLMLNDLS FLEQKIHQLQ DLVHLIVGQR 120 GQVLGQPDEF VAQQQQLITA DLTSIIVQLI STAGSLLPFV KHTLSAATPS VGQFGQFGGV 180 VFPSGPGLNG GVQPQNAGRS KFSEPPNSVD ISSNTGNEQN HIIEEHELKD EEDVEEGESL 240 LLGTYEILQL AKEEILAPHT HFCTICGKGF KRDANLRMHM RGHGDEYKTP AALAKPNKES 300 CSEPTVIKRY SCPYVGCKRN KDHKMFLPLK TILCVKNHYK RTHCDKSYIC SRCNTKKFSV 360 IADLKTHEKH CGKDKWLCSC GTTFSRKDKL FGHIALFQGH TPAIPLDETK GSAVLADKGL 420 GNQATNKVGG MNLNFSSNVN CESGVQSSLD VKGSIDDPAD YFSPLNFDTC NFGGLHEFPR 480 PPFDDSESSF AFLLSGSCNY TQKSKD

Sequence ? help Back to Top

Protein Sequence Length: 506 aa Download sequence

MDLTERLSGE LQKKIPEHPL FTNSNTQHQQ RSEDPSILDY STRIEPPFQA FNQISQKKPS  60
LLCNPNNQIK DPVQDGPVNE SLQASKVQDW DPSLMLNDLS FLEQKIHQLQ DLVHLIVGQR  120
GQVLGQPDEF VAQQQQLITA DLTSIIVQLI STAGSLLPFV KHTLSAATPS VGQFGQFGGV  180
VFPSGPGLNG GVQPQNAGRS KFSEPPNSVD ISSNTGNEQN HIIEEHELKD EEDVEEGESL  240
LLGTYEILQL AKEEILAPHT HFCTICGKGF KRDANLRMHM RGHGDEYKTP AALAKPNKES  300
CSEPTVIKRY SCPYVGCKRN KDHKMFLPLK TILCVKNHYK RTHCDKSYIC SRCNTKKFSV  360
IADLKTHEKH CGKDKWLCSC GTTFSRKDKL FGHIALFQGH TPAIPLDETK GSAVLADKGL  420
GNQATNKVGG MNLNFSSNVN CESGVQSSLD VKGSIDDPAD YFSPLNFDTC NFGGLHEFPR  480
PPFDDSESSF AFLLSGSCNY TQKSKD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G34370.2	0.0	C2H2 family protein