PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022728234.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

C2H2

Protein Properties

Length: 438aa MW: 48609.5 Da PI: 9.347

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022728234.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	17.4	1.2e-05	76	98	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C+k F r nL+ H r H XP_022728234.1 76 FVCEICNKGFQRDQNLQLHRRGH 98 89*******************88 PP
2	zf-C2H2	12.4	0.00048	152	174	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC++C+k + +s+ k H +t+ XP_022728234.1 152 WKCEKCSKIYAVQSDWKAHSKTC 174 58*****************9998 PP

Sequence ? help Back to Top
Protein Sequence Length: 438 aa Download sequence
MFPAVMSNST SLSEEASVSS GTRVQDFGGL NPIVSTISPQ QQLQKIKKKR NLPGNPDPDA 60 EVISLSPKTL LATNRFVCEI CNKGFQRDQN LQLHRRGHNL PWKLKQRNSK EVKKRAYVCP 120 EPTCVHHHPS RALGDLTGIK KHYCRKHGEK KWKCEKCSKI YAVQSDWKAH SKTCGTREYR 180 CDCGTLFSRK DSFITHRAFC DALAEESARL SANQLASAAT NPALHHFSSQ ASPNPFSLFT 240 FQTHNLLNPP WDPTQASNPN PNNPLHVKPE SHHFSPLIFQ EPPPPKALIT SPFQNLHVSN 300 NPPSNASTSA TPHLSATALL QKAATIGATA TQINNNNDNM ASQVSPDFLG FAARNLATWQ 360 KSSDRFTRDF LGLTGDHHHH HRHHHGGGNG NANVSMNVRD VLNYAGGMEL QHFERDHSLL 420 KPQGFGFTEP ASETWGDC

Sequence ? help Back to Top

Protein Sequence Length: 438 aa Download sequence

MFPAVMSNST SLSEEASVSS GTRVQDFGGL NPIVSTISPQ QQLQKIKKKR NLPGNPDPDA  60
EVISLSPKTL LATNRFVCEI CNKGFQRDQN LQLHRRGHNL PWKLKQRNSK EVKKRAYVCP  120
EPTCVHHHPS RALGDLTGIK KHYCRKHGEK KWKCEKCSKI YAVQSDWKAH SKTCGTREYR  180
CDCGTLFSRK DSFITHRAFC DALAEESARL SANQLASAAT NPALHHFSSQ ASPNPFSLFT  240
FQTHNLLNPP WDPTQASNPN PNNPLHVKPE SHHFSPLIFQ EPPPPKALIT SPFQNLHVSN  300
NPPSNASTSA TPHLSATALL QKAATIGATA TQINNNNDNM ASQVSPDFLG FAARNLATWQ  360
KSSDRFTRDF LGLTGDHHHH HRHHHGGGNG NANVSMNVRD VLNYAGGMEL QHFERDHSLL  420
KPQGFGFTEP ASETWGDC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G02670.1	1e-126	C2H2 family protein