PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022727687.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family GRAS
Protein Properties Length: 466aa    MW: 51292.4 Da    PI: 5.6384
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022727687.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS378.96.1e-1161044633374
            GRAS   3 elLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshlt 97 
                      lLl+cAe+v+ ++le a+ lL ++sel+sp g++ +R+ ayf+ AL+ar+++s+ ++y+ l +++ + ++s++ ++al+ ++ +sP++kfsh+t
  XP_022727687.1 104 GLLLQCAECVAMDNLEDATDLLPEISELSSPFGSSPERVGAYFAHALQARVVSSCLRTYSPLDTKSLTLTQSQKIFNALQSYNSISPLVKFSHFT 198
                     58********************************************************************************************* PP

            GRAS  98 aNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledlele 192
                     aNqaI +a++ge+r+H+iD+di+qGlQWp L++ LasR+++  s+RiTg+g+    s+e le tg+rLa+fA++lg+pfef++l  k  +  +l+
  XP_022727687.1 199 ANQAIFQALDGEDRIHVIDLDIMQGLQWPGLFHILASRSKKIRSMRITGFGP----SSELLELTGKRLAEFATSLGLPFEFHPLEGKIGNVTDLS 289
                     ****************************************************....99*************************9777777779** PP

            GRAS 193 eLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvEr 287
                     +L+v++ Ea+++++++  h l+d ++s       +L+l+  l+Pk++++veq+++h ++sFl rf+eal+yysalfd+l  +l+ +s er++vE+
  XP_022727687.1 290 KLEVRSSEAVVIHWMH--HCLYDITGSDLG----TLRLLTMLKPKLITIVEQDLSH-GGSFLGRFVEALHYYSALFDALGDGLGVDSLERHTVEQ 377
                     **************99..777777777777....**********************.789*********************************** PP

            GRAS 288 ellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                     +l+g ei+n+va  g +r+ + + +e+W e l+++GF+pv+l+ + a+qa+lll +++++gy++ ee+g+l lgWkd +L+++SaW+
  XP_022727687.1 378 QLFGSEIRNIVAVGGPKRTGEVK-VERWGEELKRVGFQPVSLGGNPAAQASLLLGMFPWKGYTLLEENGCLKLGWKDLSLLTASAWQ 463
                     *****************998887.9*************************************************************6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 466 aa     Download sequence    
MRPRKFESLT ELCNKTLYWT TFVPPLQKGL VPQSPISSNT SSNPNSSMKS KRVDRDVSAA  60
TGEDSFADDP SNKRPNYSSG DKIAVDEQEE TVIEGESTGL RLLGLLLQCA ECVAMDNLED  120
ATDLLPEISE LSSPFGSSPE RVGAYFAHAL QARVVSSCLR TYSPLDTKSL TLTQSQKIFN  180
ALQSYNSISP LVKFSHFTAN QAIFQALDGE DRIHVIDLDI MQGLQWPGLF HILASRSKKI  240
RSMRITGFGP SSELLELTGK RLAEFATSLG LPFEFHPLEG KIGNVTDLSK LEVRSSEAVV  300
IHWMHHCLYD ITGSDLGTLR LLTMLKPKLI TIVEQDLSHG GSFLGRFVEA LHYYSALFDA  360
LGDGLGVDSL ERHTVEQQLF GSEIRNIVAV GGPKRTGEVK VERWGEELKR VGFQPVSLGG  420
NPAAQASLLL GMFPWKGYTL LEENGCLKLG WKDLSLLTAS AWQPSD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G41920.10.0GRAS family protein