PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022727675.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB_related

Protein Properties

Length: 450aa MW: 50397.2 Da PI: 9.5829

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022727675.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	22.2	3.2e-07	129	171	3	46
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 WT+eE ++l d ++++ + + Ia ++++ Rt +++k+r+++ XP_022727675.1 129 TWTKEETDQLFDFCERFDLR-FIIIADRFPTSRTVEELKDRYYS 171 7*****************.*******************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 450 aa Download sequence
MDAKDILGLP KTPLPITQEK KSRPQKDSQR KPDGISREVY ALTGGLAPLM PSIDVSQLKR 60 RPPSDEKITW QWLPFTSSAR KDDLQLYHWA RVVNGVPPTG DYSFAKYNKS VDVIRYTDEE 120 YEKYLTDPTW TKEETDQLFD FCERFDLRFI IIADRFPTSR TVEELKDRYY SVSRAILIAR 180 APSPGEVAGH PLVKEPYNVS QETERKRALS MVLSQTKHQE RKDAEVIAEA KRIAESRMAA 240 QGVEEPDLPV TSDIGPENAE KAIGHGDAIS PSNVHVPSAA VAPSTSILAD NTSTLASLRM 300 LRVYLRTYAL EQMVQAASSS AGLRTIKRVE QTLQDLGVNL KPKVPTKAVC AEHLELRKEI 360 LTLLNLQKQL QYKEAEGSSF RDGSYGDMPG TPKRSLRAAD QDRTFVPDTI SFGGERVGKR 420 EQKRKGPGRV SETPSSPAHK RPRKLKASDL

Sequence ? help Back to Top

Protein Sequence Length: 450 aa Download sequence

MDAKDILGLP KTPLPITQEK KSRPQKDSQR KPDGISREVY ALTGGLAPLM PSIDVSQLKR  60
RPPSDEKITW QWLPFTSSAR KDDLQLYHWA RVVNGVPPTG DYSFAKYNKS VDVIRYTDEE  120
YEKYLTDPTW TKEETDQLFD FCERFDLRFI IIADRFPTSR TVEELKDRYY SVSRAILIAR  180
APSPGEVAGH PLVKEPYNVS QETERKRALS MVLSQTKHQE RKDAEVIAEA KRIAESRMAA  240
QGVEEPDLPV TSDIGPENAE KAIGHGDAIS PSNVHVPSAA VAPSTSILAD NTSTLASLRM  300
LRVYLRTYAL EQMVQAASSS AGLRTIKRVE QTLQDLGVNL KPKVPTKAVC AEHLELRKEI  360
LTLLNLQKQL QYKEAEGSSF RDGSYGDMPG TPKRSLRAAD QDRTFVPDTI SFGGERVGKR  420
EQKRKGPGRV SETPSSPAHK RPRKLKASDL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G47210.1	0.0	MYB_related family protein