PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022727508.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family ARF
Protein Properties Length: 838aa    MW: 93171.6 Da    PI: 6.0639
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022727508.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B373.72.3e-23127228199
                     EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSS CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrs 88 
                     f+k+lt sd++++g +++p++ ae+        +++++  ++l+ +d++  +W++++i+r++++r++lt+GW+ Fv+a++L +gD+v+F   +++
  XP_022727508.1 127 FCKTLTASDTSTHGGFSVPRRAAEKVfppldfsQQPPA--QELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFI--WNE 217
                     99*****************************8544444..48************************************************..889 PP

                     EE..EEEEE-S CS
              B3  89 efelvvkvfrk 99 
                     + +l+++++r+
  XP_022727508.1 218 KNQLLLGIRRA 228
                     9999****997 PP
2Auxin_resp117.61.1e-38253336183
      Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalk.vkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 
                     aahaa+t+s F+v+YnPras+seFv++++k+ ka+  ++vsvGmRf+m fete+ss rr++Gt++g+sdld+vrWpnS+Wrs+k
  XP_022727508.1 253 AAHAAATNSCFTVFYNPRASPSEFVIPLSKYIKAVFhMRVSVGMRFRMLFETEESSVRRYMGTITGISDLDSVRWPNSHWRSVK 336
                     79*******************************98659*******************************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 838 aa     Download sequence    
MKHSASGLGQ QAHEGENKCL NSELWHACAG PLVCLPTAGS RLVYFPQGHS EQVAATTNKE  60
VDAHIPNYPN LPPQLICQLH NVTMHADVET DEVYAQMTLQ PLTPEEQKDT FLPMELGIPS  120
KQPTNYFCKT LTASDTSTHG GFSVPRRAAE KVFPPLDFSQ QPPAQELIAR DLHDVEWKFR  180
HIFRGQPKRH LLTTGWSVFV SAKRLVAGDS VLFIWNEKNQ LLLGIRRATR PQTVMPSSVL  240
SSDSMHIGLL AAAAHAAATN SCFTVFYNPR ASPSEFVIPL SKYIKAVFHM RVSVGMRFRM  300
LFETEESSVR RYMGTITGIS DLDSVRWPNS HWRSVKVGWD ESTAGERQPR VSLWEIEPLT  360
TFPMYPSLFP FRLKRSWHSG SSSLHDNRDD AANGLMWLRG GSGEQGLHSL NLQSFGSIPW  420
MQQKLDLSFP GNDHTLQYLA MLANGLQNLG SGDAPRQQLQ QSLQYVQQPG GHNLLLQLQQ  480
QQQQQAVSQS VTRNIVQAQS QILTENLPPV LGQEQVGNQP EEHAQQQHNM IQSDQFQQRQ  540
PANVPSSFLK TDFINSAKFS GSVPPLQNML GSLYPESNVN LLNFSRTNQS MLAEQLSQQS  600
WDQKYTHSQV NAFASSTSRP PVFPGKDAVI EPEIGNSDAQ NSTLFGVNNN SYGLLLPTMM  660
PGFATSSSEA DVPSIPSGDP LFQNPLYGCM QDSSELQSTG QVDPLAPTRT FVKVYKSGSV  720
GRSLDISQCS SYHELREELA QMFGIDGELE DPLRSGWQLV FVDRENDILL LGDDPWEAFV  780
NNVWYIKILS PEDVQRMREQ RVEEPFGPTP GPRMNSSGTG TGGRDHVSGP SSVGSLEY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G37020.10.0ARF family protein