PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022727250.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family C2H2
Protein Properties Length: 598aa    MW: 63978.8 Da    PI: 9.7588
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022727250.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H216.13.1e-057294123
                    EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                    + C+ C+k F r  nL+ H r H
  XP_022727250.1 72 FICEVCNKGFQREQNLQLHRRGH 94
                    89*******************88 PP

2zf-C2H213.10.00029148170123
                     EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                     +kC++C+k++  +s+ k H +t+
  XP_022727250.1 148 WKCEKCSKRYAVQSDWKAHSKTC 170
                     58*****************9998 PP

Sequence ? help Back to Top
Protein Sequence    Length: 598 aa     Download sequence    
MAAASSSTPF FGTREEIQNQ MVQQQSSTTT PTSSTAPTTA TQKKKRNQPG TPNPDAEVIA  60
LSPKTLMATN RFICEVCNKG FQREQNLQLH RRGHNLPWKL KQKTTKEVKR KVYLCPEPTC  120
VHHDPSRALG DLTGIKKHYS RKHGEKKWKC EKCSKRYAVQ SDWKAHSKTC GTREYRCDCG  180
TLFSRRDSFI THRAFCDALT QESARHPTNL STIGSYHLFG SNHMSLGLSQ NPSLQDQNQP  240
SSNMLRLGSN GAAKFEHLIP PSNPSSLQNM PTSAFFMPDA ANQGFNQDHQ PHHGHGPYLN  300
KPLHGLMQLP DLQGNTNNPP TSTNPFNLGF FSNNSAASSI STSENASASS NLQNSGFLSS  360
NQFNSGNGGG GSVGDQRTEM FTSNMADQVG SGLSSLYSTS MQLQNISPHM SATALLQKAA  420
QMGSTTNNNT SSLLRGLGSS SSSGNKTHRP VLSANFGSNF GGGGGGETLR SEMENDSNIQ  480
GLMNSLANGN SSIFGGAGNG QDSNFGGFSG TGITLEQQSN NANFCNVNVA KLHQNLAASI  540
GGTDKLTLDF LGVGGMVRNI GGGFSLSERH GINISSSNPN IKSSAQAASQ QFGSAKLV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G02070.11e-119C2H2 family protein