PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022727250.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
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Family | C2H2 | ||||||||
Protein Properties | Length: 598aa MW: 63978.8 Da PI: 9.7588 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 16.1 | 3.1e-05 | 72 | 94 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C+ C+k F r nL+ H r H XP_022727250.1 72 FICEVCNKGFQREQNLQLHRRGH 94 89*******************88 PP | |||||||
2 | zf-C2H2 | 13.1 | 0.00029 | 148 | 170 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC++C+k++ +s+ k H +t+ XP_022727250.1 148 WKCEKCSKRYAVQSDWKAHSKTC 170 58*****************9998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 598 aa Download sequence |
MAAASSSTPF FGTREEIQNQ MVQQQSSTTT PTSSTAPTTA TQKKKRNQPG TPNPDAEVIA 60 LSPKTLMATN RFICEVCNKG FQREQNLQLH RRGHNLPWKL KQKTTKEVKR KVYLCPEPTC 120 VHHDPSRALG DLTGIKKHYS RKHGEKKWKC EKCSKRYAVQ SDWKAHSKTC GTREYRCDCG 180 TLFSRRDSFI THRAFCDALT QESARHPTNL STIGSYHLFG SNHMSLGLSQ NPSLQDQNQP 240 SSNMLRLGSN GAAKFEHLIP PSNPSSLQNM PTSAFFMPDA ANQGFNQDHQ PHHGHGPYLN 300 KPLHGLMQLP DLQGNTNNPP TSTNPFNLGF FSNNSAASSI STSENASASS NLQNSGFLSS 360 NQFNSGNGGG GSVGDQRTEM FTSNMADQVG SGLSSLYSTS MQLQNISPHM SATALLQKAA 420 QMGSTTNNNT SSLLRGLGSS SSSGNKTHRP VLSANFGSNF GGGGGGETLR SEMENDSNIQ 480 GLMNSLANGN SSIFGGAGNG QDSNFGGFSG TGITLEQQSN NANFCNVNVA KLHQNLAASI 540 GGTDKLTLDF LGVGGMVRNI GGGFSLSERH GINISSSNPN IKSSAQAASQ QFGSAKLV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G02070.1 | 1e-119 | C2H2 family protein |