PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022727153.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family M-type_MADS
Protein Properties Length: 265aa    MW: 30491.9 Da    PI: 6.6332
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022727153.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF343.8e-1143751850
                    HHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS
          SRF-TF 18 ngilKKAeELSvLCdaevaviifsstgklyeys 50
                    +gilKKA EL   Cda+v +++fs+tg+l  y+
  XP_022727153.1 43 EGILKKAIELAMSCDADVGLLMFSPTGRLTSYA 75
                    7*****************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 265 aa     Download sequence    
MDDAKLEGIR KWVSKFKAVS DEMFGVFLSF GSTCLFHWFL LWEGILKKAI ELAMSCDADV  60
GLLMFSPTGR LTSYANKGRI EDIFLRYINQ PDDFKGYVHN EEFLYHNLKQ LKYEAEMLDK  120
IGRFEALERK LCELNRQKYE AQERIRYYNP DMTKILTIPQ ANLHQQFVIG AIQRIEKLKK  180
AKLLEKETSP SKLNDVEMPA VKLKGSDLTT EESVNSKGKR NQSTDDHKEE ACSLAGPHLS  240
ISYLLTQKKN IEDAEDITSI DGHLS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G77950.23e-21MIKC_MADS family protein