PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022727116.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

Protein Properties

Length: 350aa MW: 40502 Da PI: 9.2328

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022727116.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	55.4	1.1e-17	5	95	1	97
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvf 97 ff +l+ s +l+ + l++p +f+e++ + s+ l+ ++g +W+v + +k ++++++++GW+eFv+ +++g f+vF+++g+s f v++f XP_022727116.1 5 FFNKLILSTTLQDKKLRIPDNFVEKFRDE--LSVAAALTVPDGHVWRVGI--KKADNKVWFQEGWQEFVERYYIRVGYFLVFRYEGNSAF--SVSIF 95 788999999**************9755..999************..********************************9999..88887 PP
2	B3	57.5	2.5e-18	248	338	4	98
E-..-HHHHTT-EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE CS B3 4 vltpsdvlksgrlvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvf 97 vl ps+ + ++++lp fae+h +g++ ++l+ ++g++W v++ yr ++ +++GW eF +n+L egD++vF+l +++e l+v++f XP_022727116.1 248 VLRPSYLYRGCIMYLPSCFAENHlSGVSG---FIKLQLPDGKQWPVRCLYRAGR--AKFSQGWYEFTLENNLGEGDVCVFELLRSREIVLKVTLF 337 78899*************999866643...5***********665555..6699*******************99888887888888 PP - CS B3 98 r 98 r XP_022727116.1 338 R 338 7 PP

Sequence ? help Back to Top
Protein Sequence Length: 350 aa Download sequence
MPRPFFNKLI LSTTLQDKKL RIPDNFVEKF RDELSVAAAL TVPDGHVWRV GIKKADNKVW 60 FQEGWQEFVE RYYIRVGYFL VFRYEGNSAF SVSIFNLYNS EINYQTNAFV GTQYNHGKQY 120 PFEELEDDEC ISPALQNLFG GSKLNNCVNW SGEVNLHTSK GVNNQPIRVK LHSSGAELPR 180 PKKPGRKKRK FDPNEQDSSA GHEDDVETRF RFYKSASARK RTVTDEERER AINAAKAFEP 240 TNPFCRVVLR PSYLYRGCIM YLPSCFAENH LSGVSGFIKL QLPDGKQWPV RCLYRAGRAK 300 FSQGWYEFTL ENNLGEGDVC VFELLRSREI VLKVTLFRVM ESARLMHQSQ

Sequence ? help Back to Top

Protein Sequence Length: 350 aa Download sequence

MPRPFFNKLI LSTTLQDKKL RIPDNFVEKF RDELSVAAAL TVPDGHVWRV GIKKADNKVW  60
FQEGWQEFVE RYYIRVGYFL VFRYEGNSAF SVSIFNLYNS EINYQTNAFV GTQYNHGKQY  120
PFEELEDDEC ISPALQNLFG GSKLNNCVNW SGEVNLHTSK GVNNQPIRVK LHSSGAELPR  180
PKKPGRKKRK FDPNEQDSSA GHEDDVETRF RFYKSASARK RTVTDEERER AINAAKAFEP  240
TNPFCRVVLR PSYLYRGCIM YLPSCFAENH LSGVSGFIKL QLPDGKQWPV RCLYRAGRAK  300
FSQGWYEFTL ENNLGEGDVC VFELLRSREI VLKVTLFRVM ESARLMHQSQ

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	181	190	PKKPGRKKRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G18990.1	1e-153	B3 family protein