PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022726994.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family TCP
Protein Properties Length: 500aa    MW: 55827 Da    PI: 8.5637
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022726994.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP152.92e-471162732134
             TCP   2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt...............ssssasec.eaessss 80 
                     agkkdrhski+T+ g+RdRR+Rls+++a++fFdLqd+LGfdk+s tieWL+ q+k+aikelt++               ss+s+se+ +a++   
  XP_022726994.1 116 AGKKDRHSKIYTAHGPRDRRMRLSLQTARKFFDLQDMLGFDKASRTIEWLFSQSKAAIKELTENlpgmnrscsgggksvSSTSESEVvSAAK--- 207
                     89**************************************************************8888777777665442222222221111... PP

             TCP  81 sasnsssg...................kaaksaakskksqksaasalnlakesrakarararertrekmrikn 134
                            +                   ++ ++a ++k++++++ s++ +a+esr karararertrekm+++ 
  XP_022726994.1 208 -------EcednmgdhqgviiargesmRSTTKARETKERNSREVSFNPVARESRDKARARARERTREKMKMRG 273
                     .......02223344555778888876666666666777777777888888*******************985 PP

Sequence ? help Back to Top
Protein Sequence    Length: 500 aa     Download sequence    
MFPSSNSYNP FPLTTHTMPG SSFLGDKHHV GSSLEDSPHP FWYLPAPFID DDDDGLLISH  60
LLSQAQQQIL VTSSNMAPPY SEVNAASPTK ETKKVTTNRK RSTVNGAKQG IPRKRAGKKD  120
RHSKIYTAHG PRDRRMRLSL QTARKFFDLQ DMLGFDKASR TIEWLFSQSK AAIKELTENL  180
PGMNRSCSGG GKSVSSTSES EVVSAAKECE DNMGDHQGVI IARGESMRST TKARETKERN  240
SREVSFNPVA RESRDKARAR ARERTREKMK MRGLEKSKKC SDESNPNELE WLRSSSPLET  300
GENSAPSTQT NSCHKVVAGQ EEQRHENAVH LLEHQMDSAS IFEKFLGIAR ATRSSSMFSY  360
SHNNIADSSG ENSEENCAVF SGDWGMNNER IQYNYCSMTN IKESTGNAQE QNPSIIFMTD  420
PNGQDHKSRP IFMTQGENPS SNLLVNSYAK IMNHNLMTPS NVAHEGRSPT SILMSTSDIG  480
LHSHYQENSA VASKFHKFYQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68800.16e-30TCP family protein