PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022726994.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
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Family | TCP | ||||||||
Protein Properties | Length: 500aa MW: 55827 Da PI: 8.5637 | ||||||||
Description | TCP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | TCP | 152.9 | 2e-47 | 116 | 273 | 2 | 134 |
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt...............ssssasec.eaessss 80 agkkdrhski+T+ g+RdRR+Rls+++a++fFdLqd+LGfdk+s tieWL+ q+k+aikelt++ ss+s+se+ +a++ XP_022726994.1 116 AGKKDRHSKIYTAHGPRDRRMRLSLQTARKFFDLQDMLGFDKASRTIEWLFSQSKAAIKELTENlpgmnrscsgggksvSSTSESEVvSAAK--- 207 89**************************************************************8888777777665442222222221111... PP TCP 81 sasnsssg...................kaaksaakskksqksaasalnlakesrakarararertrekmrikn 134 + ++ ++a ++k++++++ s++ +a+esr karararertrekm+++ XP_022726994.1 208 -------EcednmgdhqgviiargesmRSTTKARETKERNSREVSFNPVARESRDKARARARERTREKMKMRG 273 .......02223344555778888876666666666777777777888888*******************985 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 500 aa Download sequence |
MFPSSNSYNP FPLTTHTMPG SSFLGDKHHV GSSLEDSPHP FWYLPAPFID DDDDGLLISH 60 LLSQAQQQIL VTSSNMAPPY SEVNAASPTK ETKKVTTNRK RSTVNGAKQG IPRKRAGKKD 120 RHSKIYTAHG PRDRRMRLSL QTARKFFDLQ DMLGFDKASR TIEWLFSQSK AAIKELTENL 180 PGMNRSCSGG GKSVSSTSES EVVSAAKECE DNMGDHQGVI IARGESMRST TKARETKERN 240 SREVSFNPVA RESRDKARAR ARERTREKMK MRGLEKSKKC SDESNPNELE WLRSSSPLET 300 GENSAPSTQT NSCHKVVAGQ EEQRHENAVH LLEHQMDSAS IFEKFLGIAR ATRSSSMFSY 360 SHNNIADSSG ENSEENCAVF SGDWGMNNER IQYNYCSMTN IKESTGNAQE QNPSIIFMTD 420 PNGQDHKSRP IFMTQGENPS SNLLVNSYAK IMNHNLMTPS NVAHEGRSPT SILMSTSDIG 480 LHSHYQENSA VASKFHKFYQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G68800.1 | 6e-30 | TCP family protein |