PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022726927.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

bHLH

Protein Properties

Length: 530aa MW: 56554 Da PI: 6.544

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022726927.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	27.3	6.5e-09	374	422	3	55
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L++l+P + sk Ka +L + ++Y++sLq XP_022726927.1 374 NSHSLAERVRREKISERMKFLQDLVPGC----SKVTGKAVMLDEIINYVQSLQ 422 58***********************9....556***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 530 aa Download sequence
MDIGEKDKYD LEKRNDNNIN YQAPGMSSDW QFGGANLTST PMSLVASDNP LAIGSSCASA 60 SVVDSFGSNL WEHSSNSQNL GFCDISVQNG ASSSNAMGIG KGGPTSLRSS IDRLFDMDGN 120 SSSSMLKGGF FLPISTGILP QSLSQLPADS AFIERAARFS SLNGGNFSNM VNPFGIPESM 180 GLYSRGVGLM PGSKDVFAIS EMKSVSGVES QKSKLNATEA SRDACLQVEN SATLESPLKN 240 ERKSERLVRS NEEAKQGTGG SGNESDETEF SGGAGDQDEP STLDGTGGEP SAKGLSSKKR 300 KRSVKDAEVD QAKGGQPPVE AAKDSAENQP KGDQNQTTTI NKATSKQGKQ GSEASDPPKE 360 EYIHVRARRG QATNSHSLAE RVRREKISER MKFLQDLVPG CSKVTGKAVM LDEIINYVQS 420 LQRQVEFLSM KLSTVNPRLD FNIEGLLAKD ITQSRAGPSS TLGFSPNMSV GYPPLHPSQP 480 GLVQAAFPVV GNNADVICRT LGSQFTPMTG RFKKPNQVKE KLFCNIGFNA

Sequence ? help Back to Top

Protein Sequence Length: 530 aa Download sequence

MDIGEKDKYD LEKRNDNNIN YQAPGMSSDW QFGGANLTST PMSLVASDNP LAIGSSCASA  60
SVVDSFGSNL WEHSSNSQNL GFCDISVQNG ASSSNAMGIG KGGPTSLRSS IDRLFDMDGN  120
SSSSMLKGGF FLPISTGILP QSLSQLPADS AFIERAARFS SLNGGNFSNM VNPFGIPESM  180
GLYSRGVGLM PGSKDVFAIS EMKSVSGVES QKSKLNATEA SRDACLQVEN SATLESPLKN  240
ERKSERLVRS NEEAKQGTGG SGNESDETEF SGGAGDQDEP STLDGTGGEP SAKGLSSKKR  300
KRSVKDAEVD QAKGGQPPVE AAKDSAENQP KGDQNQTTTI NKATSKQGKQ GSEASDPPKE  360
EYIHVRARRG QATNSHSLAE RVRREKISER MKFLQDLVPG CSKVTGKAVM LDEIINYVQS  420
LQRQVEFLSM KLSTVNPRLD FNIEGLLAKD ITQSRAGPSS TLGFSPNMSV GYPPLHPSQP  480
GLVQAAFPVV GNNADVICRT LGSQFTPMTG RFKKPNQVKE KLFCNIGFNA

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	298	303	KKRKRS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68920.3	1e-123	bHLH family protein