PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022726924.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
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Family | bHLH | ||||||||
Protein Properties | Length: 558aa MW: 59566.2 Da PI: 5.5938 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 27.2 | 7e-09 | 374 | 422 | 3 | 55 |
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L++l+P + sk Ka +L + ++Y++sLq XP_022726924.1 374 NSHSLAERVRREKISERMKFLQDLVPGC----SKVTGKAVMLDEIINYVQSLQ 422 58*************************9....556*****************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 558 aa Download sequence |
MDIGEKDKYD LEKRNDNNIN YQAPGMSSDW QFGGANLTST PMSLVASDNP LAIGSSCASA 60 SVVDSFGSNL WEHSSNSQNL GFCDISVQNG ASSSNAMGIG KGGPTSLRSS IDRLFDMDGN 120 SSSSMLKGGF FLPISTGILP QSLSQLPADS AFIERAARFS SLNGGNFSNM VNPFGIPESM 180 GLYSRGVGLM PGSKDVFAIS EMKSVSGVES QKSKLNATEA SRDACLQVEN SATLESPLKN 240 ERKSERLVRS NEEAKQGTGG SGNESDETEF SGGAGDQDEP STLDGTGGEP SAKGLSSKKR 300 KRSVKDAEVD QAKGGQPPVE AAKDSAENQP KGDQNQTTTI NKATSKQGKQ GSEASDPPKE 360 EYIHVRARRG QATNSHSLAE RVRREKISER MKFLQDLVPG CSKVTGKAVM LDEIINYVQS 420 LQRQVEFLSM KLSTVNPRLD FNIEGLLAKD ITQSRAGPSS TLGFSPNMSV GYPPLHPSQP 480 GLVQAAFPVV GNNADVICRT LGSQFTPMTG RFKKPNQILN AWKDELHNVV QMNYGTGAPA 540 DSQDVNGSLP SDHMKVEL |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 298 | 303 | KKRKRS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G68920.3 | 1e-131 | bHLH family protein |