PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022726749.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
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Family | ARR-B | ||||||||
Protein Properties | Length: 587aa MW: 65513.8 Da PI: 5.5626 | ||||||||
Description | ARR-B family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 78.5 | 8.5e-25 | 201 | 254 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+r++Wt +LH++Fv+av+q+ G +k Pk+il+lm+v+ Lt+e+v+SHLQkYRl XP_022726749.1 201 KARVVWTVDLHQKFVKAVNQI-GFDKVGPKKILDLMNVPWLTRENVASHLQKYRL 254 68*******************.9*******************************8 PP | |||||||
2 | Myb_DNA-binding | 39.9 | 9.7e-13 | 203 | 253 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 r WT ++++++v+av+q G + +k+I m+ +t++++ s++qky+ XP_022726749.1 203 RVVWTVDLHQKFVKAVNQIGFDkvGPKKILDLMNvPWLTRENVASHLQKYR 253 678***********************************************7 PP | |||||||
3 | Response_reg | 82.5 | 1.3e-27 | 21 | 129 | 1 | 109 |
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTT CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaG 93 vl+vdD+p+ +++l+++l+k y ev+++ ++eal+ll+e++ +D+++ D++mp+m+G++ll++ e +lp+i+++ ge + + + ++ G XP_022726749.1 21 VLVVDDDPTWLKILEKMLKKCSY-EVTTCCLAREALNLLRERKdgYDIVISDVNMPDMNGFKLLEHVGLEM-DLPVIMMSVDGETSRVMKGVQHG 113 89*********************.***************999999**********************6644.8********************** PP ESEEEESS--HHHHHH CS Response_reg 94 akdflsKpfdpeelvk 109 a d+l Kp+ ++el++ XP_022726749.1 114 ACDYLLKPIRMKELRN 129 *************987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 587 aa Download sequence |
MVVESGFSSP RNDAFPAGLR VLVVDDDPTW LKILEKMLKK CSYEVTTCCL AREALNLLRE 60 RKDGYDIVIS DVNMPDMNGF KLLEHVGLEM DLPVIMMSVD GETSRVMKGV QHGACDYLLK 120 PIRMKELRNI WQHVFRKKIH EVRDIESLEG IESIQITRTG SDLFDDGHLV GGEDTTSVRK 180 RKDAENKHDD KDLSDPSSTK KARVVWTVDL HQKFVKAVNQ IGFDKVGPKK ILDLMNVPWL 240 TRENVASHLQ KYRLYLSRLQ KESDSKNSFI GMKHSDPPSK DSAASFGLHN SMNVIQDDVS 300 NDTSCFSVNN LLAQNVDLKG HEGNRKGTTS VPVSEHKGAL PVDIPDPHAA KSLEISFDHS 360 LGSVDSGINF ASFNSTNAAQ NSWSEIPEIQ FKQECESLLE NGFNQLPLPG SQHHMRTEYL 420 QPAASISSGP SITEKVASSS RIGVKPLYDG YRRNHVKHLS PTEAVELFPV QSKNQTLNNQ 480 VFEPISVTTS SMKCQDVSLN CLTDLEFGQR NLNGGVGIPL ASLTGDLQVC WLQGDCYAMN 540 FGPQDFECTE YNDPAEIPFH LYDAPRFDHE HLSDSTEYSA IDQGLFA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G67710.1 | 1e-126 | ARR-B family protein |