PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022726737.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
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Family | TCP | ||||||||
Protein Properties | Length: 539aa MW: 56418.7 Da PI: 6.9331 | ||||||||
Description | TCP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | TCP | 131.8 | 6.5e-41 | 155 | 290 | 3 | 108 |
TCP 3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssg........ 88 + k++++++hTkv+gR+RR+R++a caar+F+L++eLG+++d++tieWLlqqa++ai+++tgt++++a+++ ++s +ss+s+ s++ XP_022726737.1 155 PVKRSTKDRHTKVDGRGRRIRMPAACAARVFQLTRELGHKSDGETIEWLLQQAETAIIAATGTGTIPANFStLNVSLRSSGSTLSAPpsksaphs 249 5699****************************************************************999888888888886666666667777 PP TCP 89 .......................kaaksaa.kskksqksaasal 108 + +++++q+++++++ XP_022726737.1 250 fhgalalashfhhhpyeegfahsA---LLGfHHQQQQQQQQQQH 290 788888766666666666664321...22212222222222223 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 539 aa Download sequence |
MELTDLQSNK QTNSNNDNND STEPHHLQHQ KQPSSPPLVV VPFDGSRSSG PSSGNPFNMG 60 SISHLHPHQH AHHLLHPGSS TTTTTTTPPL SSSSSSSYSS ASTTTTNPPQ LVDASLAIAT 120 GSTSLNIDST KKNQPNLPLS STTTTSTATT TANPPVKRST KDRHTKVDGR GRRIRMPAAC 180 AARVFQLTRE LGHKSDGETI EWLLQQAETA IIAATGTGTI PANFSTLNVS LRSSGSTLSA 240 PPSKSAPHSF HGALALASHF HHHPYEEGFA HSALLGFHHQ QQQQQQQQQH LLAADQIAEA 300 LPGSGGGGGG DSGNSDENYM RKRFREDLFK DDNQQRGESS SGDGGGSGDG SLIKAFKSGL 360 SQLPKPQQDA GSSGILRPSN ILPATAMWAV APGPSSGAGS TFWMLPVTAG AGAPSVATGA 420 SGAAPSESQM WPFGTASPAS GNTLQAPLQF LPRFNLPGTV EFQGGRASPL QLGSMLMQQQ 480 PSQHLGLGMS ESNLGMLAAL NAYSRGGSNI NSEQNNPLEH HQHQPQGTDS ADEDPNNSQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G58100.1 | 4e-76 | TCP family protein |