PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022726737.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family TCP
Protein Properties Length: 539aa    MW: 56418.7 Da    PI: 6.9331
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022726737.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP131.86.5e-411552903108
             TCP   3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssg........ 88 
                     + k++++++hTkv+gR+RR+R++a caar+F+L++eLG+++d++tieWLlqqa++ai+++tgt++++a+++  ++s +ss+s+ s++        
  XP_022726737.1 155 PVKRSTKDRHTKVDGRGRRIRMPAACAARVFQLTRELGHKSDGETIEWLLQQAETAIIAATGTGTIPANFStLNVSLRSSGSTLSAPpsksaphs 249
                     5699****************************************************************999888888888886666666667777 PP

             TCP  89 .......................kaaksaa.kskksqksaasal 108
                                            +       +++++q+++++++
  XP_022726737.1 250 fhgalalashfhhhpyeegfahsA---LLGfHHQQQQQQQQQQH 290
                     788888766666666666664321...22212222222222223 PP

Sequence ? help Back to Top
Protein Sequence    Length: 539 aa     Download sequence    
MELTDLQSNK QTNSNNDNND STEPHHLQHQ KQPSSPPLVV VPFDGSRSSG PSSGNPFNMG  60
SISHLHPHQH AHHLLHPGSS TTTTTTTPPL SSSSSSSYSS ASTTTTNPPQ LVDASLAIAT  120
GSTSLNIDST KKNQPNLPLS STTTTSTATT TANPPVKRST KDRHTKVDGR GRRIRMPAAC  180
AARVFQLTRE LGHKSDGETI EWLLQQAETA IIAATGTGTI PANFSTLNVS LRSSGSTLSA  240
PPSKSAPHSF HGALALASHF HHHPYEEGFA HSALLGFHHQ QQQQQQQQQH LLAADQIAEA  300
LPGSGGGGGG DSGNSDENYM RKRFREDLFK DDNQQRGESS SGDGGGSGDG SLIKAFKSGL  360
SQLPKPQQDA GSSGILRPSN ILPATAMWAV APGPSSGAGS TFWMLPVTAG AGAPSVATGA  420
SGAAPSESQM WPFGTASPAS GNTLQAPLQF LPRFNLPGTV EFQGGRASPL QLGSMLMQQQ  480
PSQHLGLGMS ESNLGMLAAL NAYSRGGSNI NSEQNNPLEH HQHQPQGTDS ADEDPNNSQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G58100.14e-76TCP family protein