PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022726716.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family AP2
Protein Properties Length: 397aa    MW: 45177.4 Da    PI: 9.5541
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022726716.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP248.22.7e-1569128155
             AP2   1 sgykGVrwdkkrgrWvAeIrd.pseng...kr.krfslgkfgtaeeAakaaiaarkkleg 55 
                     s+++GV++++++gr++A+++d  s+n    k+ k+++lg ++ +e Aa+a++ a+ k++g
  XP_022726716.1  69 SRFRGVSRHRWTGRFEAHLWDkSSWNPtqrKKgKQVYLGAYDEEESAARAYDLAAIKYWG 128
                     789******************777755666447*************************98 PP

2AP248.42.3e-15171222155
             AP2   1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     s+++GV +++ +grW+A+I   +   g +k+ +lg++ t eeAa a++ a+ +++g
  XP_022726716.1 171 SRFRGVARHHHNGRWEARIGRvF---G-NKYLYLGTYSTQEEAAHAYDIAAIEYRG 222
                     789***99**********99966...3.6*************************97 PP

Sequence ? help Back to Top
Protein Sequence    Length: 397 aa     Download sequence    
MVTEKSELSR GRRRRLRMAE SDTIETKCTK RRRRDTSTGA LGCNNKQEEQ QQQQLQGDQP  60
TATTVKRSSR FRGVSRHRWT GRFEAHLWDK SSWNPTQRKK GKQVYLGAYD EEESAARAYD  120
LAAIKYWGTS TFTNFPVSDY EKEIEIIKSV TKEEYLPSLR RRSSGFSRGV SRFRGVARHH  180
HNGRWEARIG RVFGNKYLYL GTYSTQEEAA HAYDIAAIEY RGINAVTNFD LSTYIRRLKP  240
RANRALASEE LKTTKTTSSN LFPTDQTNDL PLFSSNPFTV EALDSPKEQD ILLKKAPGSP  300
CAKSSPPTAL SLLLRSSMFN KLVEQNLNAN FDEIEENDTK ELNEIADNNG AGEMFYNEID  360
HVPFMCSSSR GILPGLESEE NNLPLYNKTG QSRGMVP
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
11017RGRRRRLR
21234RRRRLRMAESDTIETKCTKRRRR
31335RRRRLRMAESDTIETKCTKRRRR
495103PTQRKKGKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G54320.33e-79AP2 family protein