PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022726556.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

C2H2

Protein Properties

Length: 531aa MW: 57990.2 Da PI: 9.8374

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022726556.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	16.3	2.7e-05	6	28	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C+ C+k F r nL+ H r H XP_022726556.1 6 FICEVCNKGFQREQNLQLHRRGH 28 89*******************88 PP
2	zf-C2H2	13.3	0.00025	82	104	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC++C+k++ +s+ k H +t+ XP_022726556.1 82 WKCEKCSKRYAVQSDWKAHSKTC 104 58*****************9998 PP

Sequence ? help Back to Top
Protein Sequence Length: 531 aa Download sequence
MATNRFICEV CNKGFQREQN LQLHRRGHNL PWKLRQKTTK EVKRKVYLCP EPTCVHHDPS 60 RALGDLTGIK KHYSRKHGEK KWKCEKCSKR YAVQSDWKAH SKTCGTREYR CDCGTLFSRR 120 DSFITHRAFC DALAQETARH PPSLNSIGNH LYGSSNMSLG LSQMGTQISS IQDQNNKTGD 180 ILRLGGGVRN TQFDHLLPPS MGSSSSFRPQ QPMVSSSAFF MHESNQNFNQ EHQPQQGLLG 240 NNKSFQGLMQ YPDMQNIINP PLGASLFNLS FLSNSSNTSS ISNSNNAKTD NNLASSGLLI 300 PDNFNNENGG AGTSEASNLF SNNIVGDQIT SNIPSLFSSS VQNNNMVPQM SATALLQRAA 360 QMGSSSGNNN SASLLRSFGN SSSTGTKPSN FGGILGDSTG NNLHELMNSI ASGNSSIFGG 420 GSAGVNTYST GYVQENPYTS RSSMEQEKQH LQQKLNVSIG ESDRLTRDFL GVGRIVRSMS 480 IGGVSQREQQ AQQQQQQQQQ QGIGLRASGS ERNNVTAPAG HQSFKGGGNF Q

Sequence ? help Back to Top

Protein Sequence Length: 531 aa Download sequence

MATNRFICEV CNKGFQREQN LQLHRRGHNL PWKLRQKTTK EVKRKVYLCP EPTCVHHDPS  60
RALGDLTGIK KHYSRKHGEK KWKCEKCSKR YAVQSDWKAH SKTCGTREYR CDCGTLFSRR  120
DSFITHRAFC DALAQETARH PPSLNSIGNH LYGSSNMSLG LSQMGTQISS IQDQNNKTGD  180
ILRLGGGVRN TQFDHLLPPS MGSSSSFRPQ QPMVSSSAFF MHESNQNFNQ EHQPQQGLLG  240
NNKSFQGLMQ YPDMQNIINP PLGASLFNLS FLSNSSNTSS ISNSNNAKTD NNLASSGLLI  300
PDNFNNENGG AGTSEASNLF SNNIVGDQIT SNIPSLFSSS VQNNNMVPQM SATALLQRAA  360
QMGSSSGNNN SASLLRSFGN SSSTGTKPSN FGGILGDSTG NNLHELMNSI ASGNSSIFGG  420
GSAGVNTYST GYVQENPYTS RSSMEQEKQH LQQKLNVSIG ESDRLTRDFL GVGRIVRSMS  480
IGGVSQREQQ AQQQQQQQQQ QGIGLRASGS ERNNVTAPAG HQSFKGGGNF Q

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G02070.1	1e-125	C2H2 family protein