PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022726555.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
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Family | C2H2 | ||||||||
Protein Properties | Length: 596aa MW: 64927.9 Da PI: 9.8497 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 16.1 | 3.1e-05 | 71 | 93 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C+ C+k F r nL+ H r H XP_022726555.1 71 FICEVCNKGFQREQNLQLHRRGH 93 89*******************88 PP | |||||||
2 | zf-C2H2 | 13.1 | 0.00029 | 147 | 169 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC++C+k++ +s+ k H +t+ XP_022726555.1 147 WKCEKCSKRYAVQSDWKAHSKTC 169 58*****************9998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 596 aa Download sequence |
MDASYPAGPF FGIREEDQNQ MKQQHSSTPT SSTGPAPPPP LKKKRNQPGT PNPDAEVIAL 60 SPKALMATNR FICEVCNKGF QREQNLQLHR RGHNLPWKLR QKTTKEVKRK VYLCPEPTCV 120 HHDPSRALGD LTGIKKHYSR KHGEKKWKCE KCSKRYAVQS DWKAHSKTCG TREYRCDCGT 180 LFSRRDSFIT HRAFCDALAQ ETARHPPSLN SIGNHLYGSS NMSLGLSQMG TQISSIQDQN 240 NKTGDILRLG GGVRNTQFDH LLPPSMGSSS SFRPQQPMVS SSAFFMHESN QNFNQEHQPQ 300 QGLLGNNKSF QGLMQYPDMQ NIINPPLGAS LFNLSFLSNS SNTSSISNSN NAKTDNNLAS 360 SGLLIPDNFN NENGGAGTSE ASNLFSNNIV GDQITSNIPS LFSSSVQNNN MVPQMSATAL 420 LQRAAQMGSS SGNNNSASLL RSFGNSSSTG TKPSNFGGIL GDSTGNNLHE LMNSIASGNS 480 SIFGGGSAGV NTYSTGYVQE NPYTSRSSME QEKQHLQQKL NVSIGESDRL TRDFLGVGRI 540 VRSMSIGGVS QREQQAQQQQ QQQQQQGIGL RASGSERNNV TAPAGHQSFK GGGNFQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G02070.1 | 1e-140 | C2H2 family protein |