PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022726555.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

C2H2

Protein Properties

Length: 596aa MW: 64927.9 Da PI: 9.8497

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022726555.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	16.1	3.1e-05	71	93	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C+ C+k F r nL+ H r H XP_022726555.1 71 FICEVCNKGFQREQNLQLHRRGH 93 89*******************88 PP
2	zf-C2H2	13.1	0.00029	147	169	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC++C+k++ +s+ k H +t+ XP_022726555.1 147 WKCEKCSKRYAVQSDWKAHSKTC 169 58*****************9998 PP

Sequence ? help Back to Top
Protein Sequence Length: 596 aa Download sequence
MDASYPAGPF FGIREEDQNQ MKQQHSSTPT SSTGPAPPPP LKKKRNQPGT PNPDAEVIAL 60 SPKALMATNR FICEVCNKGF QREQNLQLHR RGHNLPWKLR QKTTKEVKRK VYLCPEPTCV 120 HHDPSRALGD LTGIKKHYSR KHGEKKWKCE KCSKRYAVQS DWKAHSKTCG TREYRCDCGT 180 LFSRRDSFIT HRAFCDALAQ ETARHPPSLN SIGNHLYGSS NMSLGLSQMG TQISSIQDQN 240 NKTGDILRLG GGVRNTQFDH LLPPSMGSSS SFRPQQPMVS SSAFFMHESN QNFNQEHQPQ 300 QGLLGNNKSF QGLMQYPDMQ NIINPPLGAS LFNLSFLSNS SNTSSISNSN NAKTDNNLAS 360 SGLLIPDNFN NENGGAGTSE ASNLFSNNIV GDQITSNIPS LFSSSVQNNN MVPQMSATAL 420 LQRAAQMGSS SGNNNSASLL RSFGNSSSTG TKPSNFGGIL GDSTGNNLHE LMNSIASGNS 480 SIFGGGSAGV NTYSTGYVQE NPYTSRSSME QEKQHLQQKL NVSIGESDRL TRDFLGVGRI 540 VRSMSIGGVS QREQQAQQQQ QQQQQQGIGL RASGSERNNV TAPAGHQSFK GGGNFQ

Sequence ? help Back to Top

Protein Sequence Length: 596 aa Download sequence

MDASYPAGPF FGIREEDQNQ MKQQHSSTPT SSTGPAPPPP LKKKRNQPGT PNPDAEVIAL  60
SPKALMATNR FICEVCNKGF QREQNLQLHR RGHNLPWKLR QKTTKEVKRK VYLCPEPTCV  120
HHDPSRALGD LTGIKKHYSR KHGEKKWKCE KCSKRYAVQS DWKAHSKTCG TREYRCDCGT  180
LFSRRDSFIT HRAFCDALAQ ETARHPPSLN SIGNHLYGSS NMSLGLSQMG TQISSIQDQN  240
NKTGDILRLG GGVRNTQFDH LLPPSMGSSS SFRPQQPMVS SSAFFMHESN QNFNQEHQPQ  300
QGLLGNNKSF QGLMQYPDMQ NIINPPLGAS LFNLSFLSNS SNTSSISNSN NAKTDNNLAS  360
SGLLIPDNFN NENGGAGTSE ASNLFSNNIV GDQITSNIPS LFSSSVQNNN MVPQMSATAL  420
LQRAAQMGSS SGNNNSASLL RSFGNSSSTG TKPSNFGGIL GDSTGNNLHE LMNSIASGNS  480
SIFGGGSAGV NTYSTGYVQE NPYTSRSSME QEKQHLQQKL NVSIGESDRL TRDFLGVGRI  540
VRSMSIGGVS QREQQAQQQQ QQQQQQGIGL RASGSERNNV TAPAGHQSFK GGGNFQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G02070.1	1e-140	C2H2 family protein