PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022726554.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family C2H2
Protein Properties Length: 606aa    MW: 66053.2 Da    PI: 9.89
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022726554.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H216.13.1e-0581103123
                     EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                     + C+ C+k F r  nL+ H r H
  XP_022726554.1  81 FICEVCNKGFQREQNLQLHRRGH 103
                     89*******************88 PP

2zf-C2H213.10.00029157179123
                     EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                     +kC++C+k++  +s+ k H +t+
  XP_022726554.1 157 WKCEKCSKRYAVQSDWKAHSKTC 179
                     58*****************9998 PP

Sequence ? help Back to Top
Protein Sequence    Length: 606 aa     Download sequence    
MDASYPAGPF FGIREEDQNQ MKQQHSSTPT SSTGPAPPPP LKKKRNQPGT PSKYPIFSTN  60
SNPDAEVIAL SPKALMATNR FICEVCNKGF QREQNLQLHR RGHNLPWKLR QKTTKEVKRK  120
VYLCPEPTCV HHDPSRALGD LTGIKKHYSR KHGEKKWKCE KCSKRYAVQS DWKAHSKTCG  180
TREYRCDCGT LFSRRDSFIT HRAFCDALAQ ETARHPPSLN SIGNHLYGSS NMSLGLSQMG  240
TQISSIQDQN NKTGDILRLG GGVRNTQFDH LLPPSMGSSS SFRPQQPMVS SSAFFMHESN  300
QNFNQEHQPQ QGLLGNNKSF QGLMQYPDMQ NIINPPLGAS LFNLSFLSNS SNTSSISNSN  360
NAKTDNNLAS SGLLIPDNFN NENGGAGTSE ASNLFSNNIV GDQITSNIPS LFSSSVQNNN  420
MVPQMSATAL LQRAAQMGSS SGNNNSASLL RSFGNSSSTG TKPSNFGGIL GDSTGNNLHE  480
LMNSIASGNS SIFGGGSAGV NTYSTGYVQE NPYTSRSSME QEKQHLQQKL NVSIGESDRL  540
TRDFLGVGRI VRSMSIGGVS QREQQAQQQQ QQQQQQGIGL RASGSERNNV TAPAGHQSFK  600
GGGNFQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G02070.11e-137C2H2 family protein