PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022726554.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
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Family | C2H2 | ||||||||
Protein Properties | Length: 606aa MW: 66053.2 Da PI: 9.89 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 16.1 | 3.1e-05 | 81 | 103 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C+ C+k F r nL+ H r H XP_022726554.1 81 FICEVCNKGFQREQNLQLHRRGH 103 89*******************88 PP | |||||||
2 | zf-C2H2 | 13.1 | 0.00029 | 157 | 179 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC++C+k++ +s+ k H +t+ XP_022726554.1 157 WKCEKCSKRYAVQSDWKAHSKTC 179 58*****************9998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 606 aa Download sequence |
MDASYPAGPF FGIREEDQNQ MKQQHSSTPT SSTGPAPPPP LKKKRNQPGT PSKYPIFSTN 60 SNPDAEVIAL SPKALMATNR FICEVCNKGF QREQNLQLHR RGHNLPWKLR QKTTKEVKRK 120 VYLCPEPTCV HHDPSRALGD LTGIKKHYSR KHGEKKWKCE KCSKRYAVQS DWKAHSKTCG 180 TREYRCDCGT LFSRRDSFIT HRAFCDALAQ ETARHPPSLN SIGNHLYGSS NMSLGLSQMG 240 TQISSIQDQN NKTGDILRLG GGVRNTQFDH LLPPSMGSSS SFRPQQPMVS SSAFFMHESN 300 QNFNQEHQPQ QGLLGNNKSF QGLMQYPDMQ NIINPPLGAS LFNLSFLSNS SNTSSISNSN 360 NAKTDNNLAS SGLLIPDNFN NENGGAGTSE ASNLFSNNIV GDQITSNIPS LFSSSVQNNN 420 MVPQMSATAL LQRAAQMGSS SGNNNSASLL RSFGNSSSTG TKPSNFGGIL GDSTGNNLHE 480 LMNSIASGNS SIFGGGSAGV NTYSTGYVQE NPYTSRSSME QEKQHLQQKL NVSIGESDRL 540 TRDFLGVGRI VRSMSIGGVS QREQQAQQQQ QQQQQQGIGL RASGSERNNV TAPAGHQSFK 600 GGGNFQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G02070.1 | 1e-137 | C2H2 family protein |