PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022726548.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

Protein Properties

Length: 396aa MW: 46623 Da PI: 4.3749

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022726548.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	43.5	5.8e-14	49	131	9	97
HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE CS B3 9 dvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvf 97 +++ +r+ +p + + ++++ ++t+t+++ +g+ W v++ ++ ++g+++++kGW++F ++n +k++D++vF + g +f + vkvf XP_022726548.1 49 HSF--QRMLIPSSAV-VCSYE-LMPVTVTFRNCKGQCWHVEVEVDECDGKMFFKKGWRKFIDENSIKDKDILVFNYFG--CFVFDVKVF 131 334..5689999986.44333.46899************************************************876..777777776 PP

Sequence ? help Back to Top
Protein Sequence Length: 396 aa Download sequence
MICFNSTASP PVRLQSSLDQ KSPGIISSCG EIMSNFQAKN FFKVYLLEHS FQRMLIPSSA 60 VVCSYELMPV TVTFRNCKGQ CWHVEVEVDE CDGKMFFKKG WRKFIDENSI KDKDILVFNY 120 FGCFVFDVKV FGLDRCEKSV SHLVLDEQEM GIVLADDDHD DDDDDEEFQE EGEDSEMELE 180 EEAEEENDYD DFQQEGKDGR LELEEEDNDD EDYQEGEDSE LELVEEEENE EVLDSLNKRR 240 GQKMNNKRNE GSHEEFAAMK DEGTTSMELY PEKYVQHLNP YFVARIRLRR KNELYVPFDV 300 MRDYDLTLED KEEITFVDPY KRESIGKVVK WKDGRTCITG WRSLCNRNKV DLQRDACICE 360 FLLEKGQEKK FIQVHIVNRR KHAKSQKPRM QKQNQK

Sequence ? help Back to Top

Protein Sequence Length: 396 aa Download sequence

MICFNSTASP PVRLQSSLDQ KSPGIISSCG EIMSNFQAKN FFKVYLLEHS FQRMLIPSSA  60
VVCSYELMPV TVTFRNCKGQ CWHVEVEVDE CDGKMFFKKG WRKFIDENSI KDKDILVFNY  120
FGCFVFDVKV FGLDRCEKSV SHLVLDEQEM GIVLADDDHD DDDDDEEFQE EGEDSEMELE  180
EEAEEENDYD DFQQEGKDGR LELEEEDNDD EDYQEGEDSE LELVEEEENE EVLDSLNKRR  240
GQKMNNKRNE GSHEEFAAMK DEGTTSMELY PEKYVQHLNP YFVARIRLRR KNELYVPFDV  300
MRDYDLTLED KEEITFVDPY KRESIGKVVK WKDGRTCITG WRSLCNRNKV DLQRDACICE  360
FLLEKGQEKK FIQVHIVNRR KHAKSQKPRM QKQNQK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G34400.1	6e-13	B3 family protein