PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022726322.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB

Protein Properties

Length: 380aa MW: 42361.3 Da PI: 6.7839

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022726322.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	57.7	2.6e-18	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT+eEd++l +++q+G g+W++ +++ g++R++k+c++rw +yl XP_022726322.1 14 RGPWTPEEDQRLTVYIQQHGHGSWNALPEKAGLKRCGKSCRLRWINYL 61 89********************************************97 PP
2	Myb_DNA-binding	53.1	7.4e-17	67	112	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+++ +E++ ++++++ lG++ W++Ia++++ +Rt++++k++w+++l XP_022726322.1 67 RGNFSLQEEQTIIQLHAFLGNR-WSAIAAHLP-KRTDNEVKNHWNTHL 112 89******************.*****.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 380 aa Download sequence
MGRSTCYEKE GLKRGPWTPE EDQRLTVYIQ QHGHGSWNAL PEKAGLKRCG KSCRLRWINY 60 LRPDIKRGNF SLQEEQTIIQ LHAFLGNRWS AIAAHLPKRT DNEVKNHWNT HLKKRLIKMG 120 IDPVTHKPRI DALGSPYGHA SNDSNLSHMA QWERARLEAE ARSARDSNKQ AVRNPVQVNP 180 KIQLGAVPPP LTPRPKCLDV LKAWQGVVSG MFNFPNRDNL ESPTSISSFS NDVIQLPTTG 240 VNQNATAEGV DCIATNTDSY TCNELDEIDS WKRFVNLNQM QEFEVGLDES TSMAMQGTTY 300 STENNAWLVD SYGEAGNSNE VMEGSSSSDT LIGIPVSFSS MKVEISNGNY SIVDNGSYSV 360 CDWDSTLKFK NASSSGSPMF

Sequence ? help Back to Top

Protein Sequence Length: 380 aa Download sequence

MGRSTCYEKE GLKRGPWTPE EDQRLTVYIQ QHGHGSWNAL PEKAGLKRCG KSCRLRWINY  60
LRPDIKRGNF SLQEEQTIIQ LHAFLGNRWS AIAAHLPKRT DNEVKNHWNT HLKKRLIKMG  120
IDPVTHKPRI DALGSPYGHA SNDSNLSHMA QWERARLEAE ARSARDSNKQ AVRNPVQVNP  180
KIQLGAVPPP LTPRPKCLDV LKAWQGVVSG MFNFPNRDNL ESPTSISSFS NDVIQLPTTG  240
VNQNATAEGV DCIATNTDSY TCNELDEIDS WKRFVNLNQM QEFEVGLDES TSMAMQGTTY  300
STENNAWLVD SYGEAGNSNE VMEGSSSSDT LIGIPVSFSS MKVEISNGNY SIVDNGSYSV  360
CDWDSTLKFK NASSSGSPMF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G15310.1	4e-85	MYB family protein