PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022726208.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

C2H2

Protein Properties

Length: 345aa MW: 39414.9 Da PI: 6.2057

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022726208.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	12.5	0.00046	79	101	3	23
ET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 3 Cp..dCgksFsrksnLkrHirtH 23 C+ Cgk+F + L++H H XP_022726208.1 79 CSyeGCGKTFIDAGALRKHSHIH 101 77779**************7766 PP
2	zf-C2H2	17.4	1.2e-05	106	130	1	23
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 y+C+ Cgk F ++s LkrH H XP_022726208.1 106 YVCHweGCGKKFLDSSKLKRHFLIH 130 9********************8877 PP
3	zf-C2H2	15.9	3.8e-05	136	162	1	23
EEET....TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp....dCgksFsrksnLkrHirtH 23 ++Cp dCgk++ + + Lk+Hi +H XP_022726208.1 136 FVCPhegcDCGKRYAHEYKLKNHIASH 162 89***********************96 PP
4	zf-C2H2	14	0.00015	201	226	1	23
EEET..TTTEEESSHHHHHHHHHH.T CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirt.H 23 y Cp C k + + + Lk H+r+ H XP_022726208.1 201 YACPyeGCEKAYIHEYKLKLHLRReH 226 89**********************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 345 aa Download sequence
MEMQFAHSLF ERRPILKSKA PAVKWFKEWV PQDVVATGGK CMVLKWVNES TSKGLKEKEK 60 EPEAPEPEPE PTTEVLFLCS YEGCGKTFID AGALRKHSHI HGERQYVCHW EGCGKKFLDS 120 SKLKRHFLIH TGERDFVCPH EGCDCGKRYA HEYKLKNHIA SHHEKNTTAD VTKYATPTEK 180 ITKTPKPTGG AYGSASSDRP YACPYEGCEK AYIHEYKLKL HLRREHPGHM SDENAENATT 240 NADNEMDEAS DQDAYAGKRV NGKSQKQQSR AKPNVKMPPA KIARQKVSNP SPATLPVPKK 300 KWPVKEEIYE EEDSEETEED RENVEDGWRY GENNEDDDEE TEYED

Sequence ? help Back to Top

Protein Sequence Length: 345 aa Download sequence

MEMQFAHSLF ERRPILKSKA PAVKWFKEWV PQDVVATGGK CMVLKWVNES TSKGLKEKEK  60
EPEAPEPEPE PTTEVLFLCS YEGCGKTFID AGALRKHSHI HGERQYVCHW EGCGKKFLDS  120
SKLKRHFLIH TGERDFVCPH EGCDCGKRYA HEYKLKNHIA SHHEKNTTAD VTKYATPTEK  180
ITKTPKPTGG AYGSASSDRP YACPYEGCEK AYIHEYKLKL HLRREHPGHM SDENAENATT  240
NADNEMDEAS DQDAYAGKRV NGKSQKQQSR AKPNVKMPPA KIARQKVSNP SPATLPVPKK  300
KWPVKEEIYE EEDSEETEED RENVEDGWRY GENNEDDDEE TEYED

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G06634.1	1e-110	C2H2 family protein