PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022726207.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

C2H2

Protein Properties

Length: 373aa MW: 42692.5 Da PI: 6.4668

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022726207.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	12.3	0.0005	79	101	3	23
ET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 3 Cp..dCgksFsrksnLkrHirtH 23 C+ Cgk+F + L++H H XP_022726207.1 79 CSyeGCGKTFIDAGALRKHSHIH 101 77779**************7766 PP
2	zf-C2H2	17.3	1.4e-05	106	130	1	23
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 y+C+ Cgk F ++s LkrH H XP_022726207.1 106 YVCHweGCGKKFLDSSKLKRHFLIH 130 9********************8877 PP
3	zf-C2H2	21.7	5.3e-07	136	160	1	23
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 ++Cp Cgk Fs nL++H++tH XP_022726207.1 136 FVCPheGCGKAFSLDFNLRSHMKTH 160 89**********************9 PP
4	zf-C2H2	17.9	8.8e-06	166	190	1	23
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 + Cp dCgk++ + + Lk+Hi +H XP_022726207.1 166 HICPyaDCGKRYAHEYKLKNHIASH 190 68*********************96 PP
5	zf-C2H2	13.8	0.00017	229	254	1	23
EEET..TTTEEESSHHHHHHHHHH.T CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirt.H 23 y Cp C k + + + Lk H+r+ H XP_022726207.1 229 YACPyeGCEKAYIHEYKLKLHLRReH 254 89**********************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 373 aa Download sequence
MEMQFAHSLF ERRPILKSKA PAVKWFKEWV PQDVVATGGK CMVLKWVNES TSKGLKEKEK 60 EPEAPEPEPE PTTEVLFLCS YEGCGKTFID AGALRKHSHI HGERQYVCHW EGCGKKFLDS 120 SKLKRHFLIH TGERDFVCPH EGCGKAFSLD FNLRSHMKTH SQENYHICPY ADCGKRYAHE 180 YKLKNHIASH HEKNTTADVT KYATPTEKIT KTPKPTGGAY GSASSDRPYA CPYEGCEKAY 240 IHEYKLKLHL RREHPGHMSD ENAENATTNA DNEMDEASDQ DAYAGKRVNG KSQKQQSRAK 300 PNVKMPPAKI ARQKVSNPSP ATLPVPKKKW PVKEEIYEEE DSEETEEDRE NVEDGWRYGE 360 NNEDDDEETE YED

Sequence ? help Back to Top

Protein Sequence Length: 373 aa Download sequence

MEMQFAHSLF ERRPILKSKA PAVKWFKEWV PQDVVATGGK CMVLKWVNES TSKGLKEKEK  60
EPEAPEPEPE PTTEVLFLCS YEGCGKTFID AGALRKHSHI HGERQYVCHW EGCGKKFLDS  120
SKLKRHFLIH TGERDFVCPH EGCGKAFSLD FNLRSHMKTH SQENYHICPY ADCGKRYAHE  180
YKLKNHIASH HEKNTTADVT KYATPTEKIT KTPKPTGGAY GSASSDRPYA CPYEGCEKAY  240
IHEYKLKLHL RREHPGHMSD ENAENATTNA DNEMDEASDQ DAYAGKRVNG KSQKQQSRAK  300
PNVKMPPAKI ARQKVSNPSP ATLPVPKKKW PVKEEIYEEE DSEETEEDRE NVEDGWRYGE  360
NNEDDDEETE YED

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G06634.1	1e-139	C2H2 family protein