PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022725995.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

CO-like

Protein Properties

Length: 450aa MW: 49861.9 Da PI: 6.8159

Description

CO-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022725995.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	21	6.9e-07	12	43	4	35
zf-B_box 4 rkCpeHeekelqlfCedCqqllCedClleeHk 35 C+ ++e+ + l+C+ ++ lC C + H+ XP_022725995.1 12 VPCDFCNEQMAVLYCRADSAKLCLFCDQRVHS 43 57**************************9995 PP
2	zf-B_box	25	3.9e-08	54	99	3	42
zf-B_box 3 erkCpeHeekelqlfCedCqqllCedClleeHkg......Htvvpl 42 ++C++++ ++++ C +++ lC++C +H + H+++p+ XP_022725995.1 54 SQICDNCSTEPVSVRCATDNLVLCQECDWDGHAScsasaaHDRTPV 99 579*****************************87889999988875 PP
3	CCT	64.3	3.8e-22	402	445	1	44
CCT 1 ReaallRYkeKrktRkFeKkirYesRKavAesRpRvKGrFvkqa 44 R +a++RYkeK+ktR+++K+irYesRKa+A++R+RvKGrFvk++ XP_022725995.1 402 RGNAMQRYKEKKKTRRYDKHIRYESRKARADTRKRVKGRFVKAT 445 7789**************************************87 PP

Sequence ? help Back to Top
Protein Sequence Length: 450 aa Download sequence
MVSPKPESRE TVPCDFCNEQ MAVLYCRADS AKLCLFCDQR VHSANLLSRK HLRSQICDNC 60 STEPVSVRCA TDNLVLCQEC DWDGHASCSA SAAHDRTPVE GFSGCPSALE LASAWGFDLD 120 EKKPSDRSWN RCYEELVAPS VQSWVYKTNL QEMMVPYESF SGGEMLKKQN HGGGKCKQVI 180 FKQLVELMKR DFVGGGGGEN LVPNVEANGS FLGTQEVIQP QQQQQTQTTF SCLLRMQTQE 240 IDRIMDGGDA LWNGNPNGQT PQIWDFKLGR LRGEEECSQA QLEDVGYVGS DAGFMINNFS 300 EPLTNAKLVG DKYSISYPPS QDDMASINNN SSNPAAILGP ATSESNNLPT AKPSSGSAFG 360 KLKGTSSSNN VHLMEQSFLV RCDQTRLAAP SKADLELLAQ NRGNAMQRYK EKKKTRRYDK 420 HIRYESRKAR ADTRKRVKGR FVKATEAADD

Sequence ? help Back to Top

Protein Sequence Length: 450 aa Download sequence

MVSPKPESRE TVPCDFCNEQ MAVLYCRADS AKLCLFCDQR VHSANLLSRK HLRSQICDNC  60
STEPVSVRCA TDNLVLCQEC DWDGHASCSA SAAHDRTPVE GFSGCPSALE LASAWGFDLD  120
EKKPSDRSWN RCYEELVAPS VQSWVYKTNL QEMMVPYESF SGGEMLKKQN HGGGKCKQVI  180
FKQLVELMKR DFVGGGGGEN LVPNVEANGS FLGTQEVIQP QQQQQTQTTF SCLLRMQTQE  240
IDRIMDGGDA LWNGNPNGQT PQIWDFKLGR LRGEEECSQA QLEDVGYVGS DAGFMINNFS  300
EPLTNAKLVG DKYSISYPPS QDDMASINNN SSNPAAILGP ATSESNNLPT AKPSSGSAFG  360
KLKGTSSSNN VHLMEQSFLV RCDQTRLAAP SKADLELLAQ NRGNAMQRYK EKKKTRRYDK  420
HIRYESRKAR ADTRKRVKGR FVKATEAADD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G33500.2	1e-116	CO-like family protein