PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022725944.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

Whirly

Protein Properties

Length: 277aa MW: 30972.4 Da PI: 9.8018

Description

Whirly family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022725944.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Whirly	207.1	2e-64	100	238	1	139
Whirly 1 svyktkaalkvkavrptfealdsgnlklkraGglllelanataerkydWekkqsfalsatevaelvdlaskesceffhdpaakgsneGkvrkalk 95 s+yk+kaal v++++p+f+ ldsg++k++raG++ll++a+a+++r+ydW++kq f+ls+te+++l++l+++esceffhdp++++s+eGkvrk+lk XP_022725944.1 100 SIYKGKAALAVEPRAPEFVPLDSGAFKVSRAGFVLLQFAPAAGVRQYDWSRKQLFSLSVTEIGTLISLGARESCEFFHDPFKGKSEEGKVRKVLK 194 7******************************************************************************************** PP Whirly 96 vePlpdGsGlfvnlsvtnslvkgnesfsvPvskaefavlrsllv 139 vePl+d sG+++nl v+n+l++ ++++++P+++aef+vl+s+++ XP_022725944.1 195 VEPLADVSGHLFNLGVQNKLLNMDQNIYIPITRAEFTVLNSAFN 238 **************************************9996 PP

Sequence ? help Back to Top
Protein Sequence Length: 277 aa Download sequence
MLKFQFLSCP PLYAQTLNPN PNSNTKLCPF FCHSFSSLKC TQTHAINFNP LSLTLKPSKF 60 SLKCRQSEYF DQKQRFSNSS STSSPPPSAG LPPRFYVGHS IYKGKAALAV EPRAPEFVPL 120 DSGAFKVSRA GFVLLQFAPA AGVRQYDWSR KQLFSLSVTE IGTLISLGAR ESCEFFHDPF 180 KGKSEEGKVR KVLKVEPLAD VSGHLFNLGV QNKLLNMDQN IYIPITRAEF TVLNSAFNFI 240 LPYLLGWHAF ANSSKPDETT RLNNANPRSG GDYEWSR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G14410.1	1e-120	Whirly family protein