PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022725830.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

TCP

Protein Properties

Length: 264aa MW: 27119.3 Da PI: 10.5886

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022725830.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	122.7	4.2e-38	29	116	3	90
TCP 3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssaseceaesssssasnsssg.ka 90 +kk +++++h+kv+gR+RR+R+++ caar+F+L++eLG+++d++tieWLl+qa+p+i+++tgt++++as++ ++s s+ ++++s + ++ XP_022725830.1 29 VKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFS-TVSVSVRGGANSTSlSS 116 699**************************************************************999777.33333333333333211 PP

Sequence ? help Back to Top
Protein Sequence Length: 264 aa Download sequence
MSNSEGGATN GAIMDPQRQQ PPGNGSLGVK KPPSKDRHSK VDGRGRRIRM PIICAARVFQ 60 LTRELGHKSD GQTIEWLLRQ AEPSIIAATG TGTTPASFST VSVSVRGGAN STSLSSTTSS 120 SSLDHKPLLG PTSFILGKRV RSDDDSAGKD DSGVVTVGPG VGSIVGPTGT HTGGFWALPA 180 RPDFGQVWSF APPPPPEMVV QTAAAAAAAA AQQPAAAALF VQQQQAMGEA SAARVGNYHP 240 GHLNLLASLS GAPGGSGRRD EDRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G23280.1	9e-62	TCP family protein