PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022725804.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family C3H
Protein Properties Length: 370aa    MW: 41539.5 Da    PI: 7.7714
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022725804.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH23.68.9e-08124146426
                     ---SGGGGTS--TTTTT-SS-SS CS
         zf-CCCH   4 elCrffartGtCkyGdrCkFaHg 26 
                       C++f+ +G C++Gd C FaHg
  XP_022725804.1 124 TVCSDFRHGGGCPRGDDCDFAHG 146
                     68********************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 370 aa     Download sequence    
MSTACAEQHK FQPSHQLAKK LPFKDDIEIP TRKLLLSSNH ISENTTMQLP YETSLQKYLP  60
SNRSSNEDED NDSDPYATDH FRMYEFKVRR CTRSRSHDWT DCPFAHPGEK ARRRDPCRYH  120
YSSTVCSDFR HGGGCPRGDD CDFAHGVFEC WLHPTRYRTE ACKDGKNCKR KVCFFAHSSR  180
ELRILPAATL KYKNSSPCIS SPMNRNNHCC LFCHSVTSSP TSTLLGLSHL SRSPSLSPPL  240
SPAKQRTSLS GFLPISRYSD RLRKFGTEMM SYKDVLNKLM SSLENMNFCE VSSPMAGGND  300
LSTNIPWFDV SFNGEDQTQF VLSPSGASPS GSGEYFGATS KGFGGDEKLN ENTVASGPDP  360
DLGWVNELLM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G03790.11e-72C3H family protein