PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022725779.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
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Family | C2H2 | ||||||||
Protein Properties | Length: 421aa MW: 47037.1 Da PI: 8.2169 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 18.7 | 4.9e-06 | 57 | 79 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C++C++ F r nL+ H r+H XP_022725779.1 57 YVCEICNQGFQRDQNLQMHRRRH 79 9*********************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 421 aa Download sequence |
MLENTTSSAL PSSSSDPLTP LENEATQKRK RKPAGTPDPD AEVVSLSPKT LLESDRYVCE 60 ICNQGFQRDQ NLQMHRRRHK VPWKLLKRET QEVKKRVYVC PEPSCLHHDP CHALGDLVGI 120 KKHFRRKHSN QKQWVCDKCC KGYAVQSDYK AHLKTCGTRG HSCDCGRVFS RVESFIEHQD 180 NCNVRRVQPE LQALQPACSS RTASNTSPSS DANFSIAPLP GLPMPKSTEP VFLYNHVSTS 240 DHQHQLQHNL ELQLLPSPST QLSRNSDENY GTHLKLSIGS SDGGEKCESN KLSLATCREK 300 NASETALEAT RLKEFASEQL KLAMAETAYA EKARQEAKRQ IEMAELEFAS AKRIRQQAQD 360 VLEKAQILKD QATKKISATI MRITCQACKH QFQISTAAVP ADETSLAMSY MSSATTEGEG 420 E |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G01940.1 | 1e-157 | C2H2 family protein |