PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022725727.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

Trihelix

Protein Properties

Length: 369aa MW: 42542.8 Da PI: 6.933

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022725727.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	89.1	5e-28	72	153	2	86
trihelix 2 WtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 W ++e++ Li++rrem++ ++++k++k+lWe++s+kmre+gf rsp++C++kw+nl k++kk+k+++++ s +++y+++++ XP_022725727.1 72 WVQDETRSLIAFRREMDSLFNTSKSNKHLWEQISAKMREKGFDRSPTMCTDKWRNLLKEFKKTKHQDRGS---GSAKMSYYKEID 153 ******************************************************************84...556899*997 PP

Sequence ? help Back to Top
Protein Sequence Length: 369 aa Download sequence
MYLSEKPRPI DLYKEDVPAT ARDMIIEVTT NGDLPPHHHP PPHQQQQQQM ILGESSGEDP 60 EVKAPKKRAE TWVQDETRSL IAFRREMDSL FNTSKSNKHL WEQISAKMRE KGFDRSPTMC 120 TDKWRNLLKE FKKTKHQDRG SGSAKMSYYK EIDEILRERT KHLYKSPTPP PPKLDSFMHF 180 ADKASGRPTL NLERRLDHDG HPLAITAADA VAAGGVPPWN WREASGNGGD CQSYGGRVIT 240 VKFGDYTRRI GIDGTADAIR EAIKSAFRLR TKRAFWLEDE DHIVRSLDRE MPLGNYTLHL 300 DEGLAIKVCH YDESDHIPVH TEEKIFYTED DYREYLVRRG YTGLREIDGY RNIDNMDDLQ 360 TNALYRGVS

Sequence ? help Back to Top

Protein Sequence Length: 369 aa Download sequence

MYLSEKPRPI DLYKEDVPAT ARDMIIEVTT NGDLPPHHHP PPHQQQQQQM ILGESSGEDP  60
EVKAPKKRAE TWVQDETRSL IAFRREMDSL FNTSKSNKHL WEQISAKMRE KGFDRSPTMC  120
TDKWRNLLKE FKKTKHQDRG SGSAKMSYYK EIDEILRERT KHLYKSPTPP PPKLDSFMHF  180
ADKASGRPTL NLERRLDHDG HPLAITAADA VAAGGVPPWN WREASGNGGD CQSYGGRVIT  240
VKFGDYTRRI GIDGTADAIR EAIKSAFRLR TKRAFWLEDE DHIVRSLDRE MPLGNYTLHL  300
DEGLAIKVCH YDESDHIPVH TEEKIFYTED DYREYLVRRG YTGLREIDGY RNIDNMDDLQ  360
TNALYRGVS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G13450.1	0.0	Trihelix family protein