PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022725726.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

Trihelix

Protein Properties

Length: 382aa MW: 43879.2 Da PI: 6.5722

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022725726.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	89	5.3e-28	72	153	2	86
trihelix 2 WtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 W ++e++ Li++rrem++ ++++k++k+lWe++s+kmre+gf rsp++C++kw+nl k++kk+k+++++ s +++y+++++ XP_022725726.1 72 WVQDETRSLIAFRREMDSLFNTSKSNKHLWEQISAKMREKGFDRSPTMCTDKWRNLLKEFKKTKHQDRGS---GSAKMSYYKEID 153 ******************************************************************84...556899*997 PP

Sequence ? help Back to Top
Protein Sequence Length: 382 aa Download sequence
MYLSEKPRPI DLYKEDVPAT ARDMIIEVTT NGDLPPHHHP PPHQQQQQQM ILGESSGEDP 60 EVKAPKKRAE TWVQDETRSL IAFRREMDSL FNTSKSNKHL WEQISAKMRE KGFDRSPTMC 120 TDKWRNLLKE FKKTKHQDRG SGSAKMSYYK EIDEILRERT KHLYKSPTPP PPKLDSFMHF 180 ADKGFEDTGI SFGPVEASGR PTLNLERRLD HDGHPLAITA ADAVAAGGVP PWNWREASGN 240 GGDCQSYGGR VITVKFGDYT RRIGIDGTAD AIREAIKSAF RLRTKRAFWL EDEDHIVRSL 300 DREMPLGNYT LHLDEGLAIK VCHYDESDHI PVHTEEKIFY TEDDYREYLV RRGYTGLREI 360 DGYRNIDNMD DLQTNALYRG VS

Sequence ? help Back to Top

Protein Sequence Length: 382 aa Download sequence

MYLSEKPRPI DLYKEDVPAT ARDMIIEVTT NGDLPPHHHP PPHQQQQQQM ILGESSGEDP  60
EVKAPKKRAE TWVQDETRSL IAFRREMDSL FNTSKSNKHL WEQISAKMRE KGFDRSPTMC  120
TDKWRNLLKE FKKTKHQDRG SGSAKMSYYK EIDEILRERT KHLYKSPTPP PPKLDSFMHF  180
ADKGFEDTGI SFGPVEASGR PTLNLERRLD HDGHPLAITA ADAVAAGGVP PWNWREASGN  240
GGDCQSYGGR VITVKFGDYT RRIGIDGTAD AIREAIKSAF RLRTKRAFWL EDEDHIVRSL  300
DREMPLGNYT LHLDEGLAIK VCHYDESDHI PVHTEEKIFY TEDDYREYLV RRGYTGLREI  360
DGYRNIDNMD DLQTNALYRG VS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G13450.1	0.0	Trihelix family protein