PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022725332.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
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Family | bHLH | ||||||||
Protein Properties | Length: 459aa MW: 50578.1 Da PI: 7.035 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 27.2 | 6.9e-09 | 246 | 292 | 5 | 55 |
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 h+ +Er RR++i +++ L++l+P + +k Ka +L + + Y++sLq XP_022725332.1 246 HSLAERVRREKISERMKYLQDLVPGC----NKITGKAGMLDEITSYVQSLQ 292 999***********************....999*****************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 459 aa Download sequence |
MNNAFPEILQ CSDMTVLERQ KAPLQRQQEQ LQQQEKQQQS YFSELRGVFS NQTSHVQGLQ 60 GGLLSGDSLL CDMVMTPQAK PDPGLETARS ELGNIDIAGM GFGQCGYVNG PSFDMNYAIY 120 RTSSCPPAVV AAAVATEGVE AKGKESVESE KLGSAIGRES FKKRKADKLH CSKVVAEDDS 180 KRIKACAEER ESKITGPNTN KSSSSNNNNK KQTSTETSKE NSKFSKVQKP DYIHVRARRG 240 QATDRHSLAE RVRREKISER MKYLQDLVPG CNKITGKAGM LDEITSYVQS LQQQVELLSM 300 KLAAVNPKLD FNIDNLFAKQ VRQNPAAVLH FSVTNYAGIV CSRQLFASCT TTFPTVGMLS 360 EMANPPYLQF NPVQQVVSCR EVEMGMGMGM EINSPDMALQ RTINAPLSIP DASFLDSSCL 420 AQFQSSAAWD VELQNLYNVG FDQEGSTTPF PSQPFTGFH |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G34530.1 | 8e-48 | bHLH family protein |