PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_022725105.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
|
||||||||
Family | ZF-HD | ||||||||
Protein Properties | Length: 229aa MW: 25335.1 Da PI: 5.5738 | ||||||||
Description | ZF-HD family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | ZF-HD_dimer | 54.7 | 2.4e-17 | 40 | 88 | 7 | 58 |
ZF-HD_dimer 7 keClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRreve 58 eC++N s ++vDGC Ef++ + + + CaACgCHR+FHR+ v XP_022725105.1 40 MECRRNISLSACRYTVDGCSEFLKGSAG---ENPMLCAACGCHRSFHRKVVP 88 69*********************98433...5899**************875 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 229 aa Download sequence |
MDDNDKSNNG AGHEGQAQPK AVRRRLNCQA VGEQAGDTNM ECRRNISLSA CRYTVDGCSE 60 FLKGSAGENP MLCAACGCHR SFHRKVVPTH FRNYSNYLLF NGIPFVRPVQ QPLQPPLPLM 120 PQPEIPHELV AESASEEEGL ETDEASEKRS ELDSETIMEK ERNTDQTNIN AVLEVQASSV 180 RGINREGGQD ETKEALLCAK SAFTGKCTAS TPSTRHQILH YEIDHQQHG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G18835.1 | 1e-11 | ZF-HD family protein |