PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022725070.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family B3
Protein Properties Length: 304aa    MW: 34900.1 Da    PI: 10.435
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022725070.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B353.93.2e-1735123598
                     -..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
              B3   5 ltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 
                      ++ ++ +s+ l++p +f+++h ++k+ + + +l+ +sg  W++++  ++++g ++++ GW++F +++ L +++f++F+++g+++f   v++f 
  XP_022725070.1  35 IIQVNHKASNSLIIPPHFVTTH-LPKRMPSEAVLKGPSGDCWNITV--CQQKGNTIMQHGWQQFYQDHSLGDNEFLLFRHNGNMCF--DVQIFY 123
                     45667788899********999.56778889***************..999999*******************************9..888875 PP

2B357.62.3e-18212303198
                     EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 
                     f+  lt+++v k  +l +p +f++++  +    ++ t+ +++ +sW+v++iy+      v++kGW++F+ +n+Lk gD++vF+l+    ++++v+
  XP_022725070.1 212 FKHCLTRANVEKPFLLAIPCSFVKANLPQ--ARREFTFSTSKQKSWKVTYIYSEIN--KVFSKGWRGFAIDNKLKMGDSCVFELVA--PQKMRVH 300
                     677899999**************999534..3358***************774443..589**********************986..5667999 PP

                     EE- CS
              B3  96 vfr 98 
                     +f 
  XP_022725070.1 301 IFP 303
                     885 PP

Sequence ? help Back to Top
Protein Sequence    Length: 304 aa     Download sequence    
MQSSLQSKKK KMKKSSRDME SNLPEHDNRP CFYKIIQVNH KASNSLIIPP HFVTTHLPKR  60
MPSEAVLKGP SGDCWNITVC QQKGNTIMQH GWQQFYQDHS LGDNEFLLFR HNGNMCFDVQ  120
IFYKSGCERK IVSITRTHRD SIVEIKEEEI DFSKIGETEP QVQTSGKGKR KSTAEKNSPS  180
SSRKQSRPPA ARKSKGNLSK AAEDFTSKFP HFKHCLTRAN VEKPFLLAIP CSFVKANLPQ  240
ARREFTFSTS KQKSWKVTYI YSEINKVFSK GWRGFAIDNK LKMGDSCVFE LVAPQKMRVH  300
IFPH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G18000.11e-32B3 family protein