PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022725070.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
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Family | B3 | ||||||||
Protein Properties | Length: 304aa MW: 34900.1 Da PI: 10.435 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 53.9 | 3.2e-17 | 35 | 123 | 5 | 98 |
-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS B3 5 ltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 ++ ++ +s+ l++p +f+++h ++k+ + + +l+ +sg W++++ ++++g ++++ GW++F +++ L +++f++F+++g+++f v++f XP_022725070.1 35 IIQVNHKASNSLIIPPHFVTTH-LPKRMPSEAVLKGPSGDCWNITV--CQQKGNTIMQHGWQQFYQDHSLGDNEFLLFRHNGNMCF--DVQIFY 123 45667788899********999.56778889***************..999999*******************************9..888875 PP | |||||||
2 | B3 | 57.6 | 2.3e-18 | 212 | 303 | 1 | 98 |
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 f+ lt+++v k +l +p +f++++ + ++ t+ +++ +sW+v++iy+ v++kGW++F+ +n+Lk gD++vF+l+ ++++v+ XP_022725070.1 212 FKHCLTRANVEKPFLLAIPCSFVKANLPQ--ARREFTFSTSKQKSWKVTYIYSEIN--KVFSKGWRGFAIDNKLKMGDSCVFELVA--PQKMRVH 300 677899999**************999534..3358***************774443..589**********************986..5667999 PP EE- CS B3 96 vfr 98 +f XP_022725070.1 301 IFP 303 885 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 304 aa Download sequence |
MQSSLQSKKK KMKKSSRDME SNLPEHDNRP CFYKIIQVNH KASNSLIIPP HFVTTHLPKR 60 MPSEAVLKGP SGDCWNITVC QQKGNTIMQH GWQQFYQDHS LGDNEFLLFR HNGNMCFDVQ 120 IFYKSGCERK IVSITRTHRD SIVEIKEEEI DFSKIGETEP QVQTSGKGKR KSTAEKNSPS 180 SSRKQSRPPA ARKSKGNLSK AAEDFTSKFP HFKHCLTRAN VEKPFLLAIP CSFVKANLPQ 240 ARREFTFSTS KQKSWKVTYI YSEINKVFSK GWRGFAIDNK LKMGDSCVFE LVAPQKMRVH 300 IFPH |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G18000.1 | 1e-32 | B3 family protein |