PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022725014.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

ARR-B

Protein Properties

Length: 550aa MW: 61454.2 Da PI: 6.8663

Description

ARR-B family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022725014.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	66.3	5.1e-21	254	307	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k rl+W++eLH++F a++ L G ++A Pk il++m+ + Lt +v+SHLQkY+ XP_022725014.1 254 KSRLVWSQELHHKFTAAISAL-GDKNARPKLILKMMNEPNLTHRQVASHLQKYKA 307 68*****************.9****************************85 PP
2	Myb_DNA-binding	38.4	3e-12	256	306	1	48
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 r+ W++e++ ++ a+ lG + ++k+I ++m+ ++t q+ s++qky+ XP_022725014.1 256 RLVWSQELHHKFTAAISALGDKnaRPKLILKMMNePNLTHRQVASHLQKYK 306 789***************99**************************7 PP
3	Response_reg	44.1	1.1e-15	17	122	1	107
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTT CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaG 93 +l+vd + + ++ l+++le+ y +v++++ + a+ +++e++ + l++ i+m +++ + +l + + + +pii+++++ +++ a++a+ +G XP_022725014.1 17 ILVVDHDTTSLMYLASMLEQYSY-QVTTTEVTSVAVSMIRERKerFKLVMANINMDDINSVSFLGILIKMD--IPIILMSSERSQNAAQKAIAYG 108 89*******************.***********777777******************9866..****************** PP ESEEEESS--HHHH CS Response_reg 94 akdflsKpfdpeel 107 a +l+Kp++ ++l XP_022725014.1 109 ACLHLEKPISLNDL 122 ********9988 PP

Sequence ? help Back to Top
Protein Sequence Length: 550 aa Download sequence
MDELRSKVPE CARGLPILVV DHDTTSLMYL ASMLEQYSYQ VTTTEVTSVA VSMIRERKER 60 FKLVMANINM DDINSVSFLG ILIKMDIPII LMSSERSQNA AQKAIAYGAC LHLEKPISLN 120 DLQYLWQHVY RSDKDSMKKE ASFGKESGAT KKNEAATDAK PTAARNDHFR GIDMSTTTND 180 LKGEKTRIEQ ILAIEGLKHG GSSSKTKRSY ADEEEKRNDK RKLHPTDSEE RETASEEGGK 240 EKKKNQSSCS RVRKSRLVWS QELHHKFTAA ISALGDKNAR PKLILKMMNE PNLTHRQVAS 300 HLQKYKAQVQ RISTACTSNL SSVANASTSI YGKPGLFCIP QQNKLVLSHL GHKSPNFSIG 360 DTCQYLNFPQ ESTAPISSLY QNQQFPNVPQ NIHQKQHVTL DSTDSISSLN QTQELPSMLP 420 YMHQKLDFIP ESTVTASISV NQSQVFVSST QTKKSIDFVA AEYSAMPNAD KSVTEIIGQN 480 AEVDTTTYAV TSTILSENQK QHSPEFVDLL KVLDDEADEC RGSGIEPHPG EVDQYCEWLK 540 EAMLGNNEQP

Sequence ? help Back to Top

Protein Sequence Length: 550 aa Download sequence

MDELRSKVPE CARGLPILVV DHDTTSLMYL ASMLEQYSYQ VTTTEVTSVA VSMIRERKER  60
FKLVMANINM DDINSVSFLG ILIKMDIPII LMSSERSQNA AQKAIAYGAC LHLEKPISLN  120
DLQYLWQHVY RSDKDSMKKE ASFGKESGAT KKNEAATDAK PTAARNDHFR GIDMSTTTND  180
LKGEKTRIEQ ILAIEGLKHG GSSSKTKRSY ADEEEKRNDK RKLHPTDSEE RETASEEGGK  240
EKKKNQSSCS RVRKSRLVWS QELHHKFTAA ISALGDKNAR PKLILKMMNE PNLTHRQVAS  300
HLQKYKAQVQ RISTACTSNL SSVANASTSI YGKPGLFCIP QQNKLVLSHL GHKSPNFSIG  360
DTCQYLNFPQ ESTAPISSLY QNQQFPNVPQ NIHQKQHVTL DSTDSISSLN QTQELPSMLP  420
YMHQKLDFIP ESTVTASISV NQSQVFVSST QTKKSIDFVA AEYSAMPNAD KSVTEIIGQN  480
AEVDTTTYAV TSTILSENQK QHSPEFVDLL KVLDDEADEC RGSGIEPHPG EVDQYCEWLK  540
EAMLGNNEQP

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	216	223	KRNDKRKL
2	239	245	GKEKKKN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68210.1	5e-47	ARR-B family protein