PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022724925.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family M-type_MADS
Protein Properties Length: 375aa    MW: 42275.1 Da    PI: 7.0208
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022724925.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF64.21.4e-201053245
                    ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSE CS
          SRF-TF  2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgk 45
                    + en+  rq t++kR++gi+KKA+ELS+LCd+e+ +++fs+t+k
  XP_022724925.1 10 KLENTNGRQATYAKRKHGIMKKANELSILCDVEIILLMFSPTNK 53
                    6799*************************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 375 aa     Download sequence    
MGRVKLKIKK LENTNGRQAT YAKRKHGIMK KANELSILCD VEIILLMFSP TNKPSVCIGK  60
RSSIEDIIEK FAQLTPQERA KRKLESFEAL KKTFKKLDHD VNIHEFLGTS TQTIEDLTNQ  120
ARLLQTRLSD IHRRLSCWTN IDKINNVEHL GQMEDSLKEY LNQIRAHMEN LGKQQLLSFE  180
CTSQFQNEMH VPFRMGIEQQ LQPLAWVPNN DSRHMALSED PNLFPHRDVE CSASSSFGSY  240
SGYFGTAKSS ELSSSGQENS ILNDLGGNAS LQLQLGGQCP FFSYNLNILN DPKFPPVAEM  300
NFQETPADYH VNGALLSPRA GYDATQGSWA STSGPCAVTM FDEPLYSRVS LSLLLPLCFQ  360
CLSNIACVYL QLQRD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G03060.22e-98M-type_MADS family protein