PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022724642.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family C2H2
Protein Properties Length: 569aa    MW: 62048.3 Da    PI: 9.1811
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022724642.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H216.52.4e-0590112123
                     EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                     ++C++C+k F r  nL+ H r H
  XP_022724642.1  90 FVCEICSKGFQRDQNLQLHRRGH 112
                     89*******************88 PP

2zf-C2H212.50.00043166188123
                     EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                     +kC +C+k++  +s+ k H +t+
  XP_022724642.1 166 WKCDKCSKRYAVQSDWKAHSKTC 188
                     58*****************9998 PP

Sequence ? help Back to Top
Protein Sequence    Length: 569 aa     Download sequence    
MMKDLLFQQR QQQQQALEEN MSNLTSASGE ASASSGNRTE AGTNYPQQYF STPPPRTQLV  60
KKKRNLPGNP DPDAEVIALS PKTLMATNRF VCEICSKGFQ RDQNLQLHRR GHNLPWKLKQ  120
RASKEVRKKV YVCPEPSCVH HDPSRALGDL TGIKKHFFRK HGEKTWKCDK CSKRYAVQSD  180
WKAHSKTCGT REYRCDCGTL FSRRDSFITH RAFCDALAEE SARAITGANP LLSPHQPSPS  240
LSTSHINLQV PQFNPQDIQL QAFSLKKEQQ SFTTLRPEIP PWLASQPMLG AGRGPTQPID  300
LSFSSSSIFS TRLDHQEFTQ THHQDLTLNE NPNPNPSLGS TLPPYHPTTV PSPQLSATAL  360
LQKAAQMGAT MTCKAGSSSA PATTATAAAV ATSLMRPHQQ THVSADSAGN NSTTTASFGL  420
NLSSREELAV GSGFIHGLAP FGNHKPAAAN AGSGAPPSLL QDMMNSLSSA TRFDVTSFDD  480
AFGGILNTKN RGSFINESLS KTTTPTPTTN ATRNDNQSTG GSTQGEELTR DFLGLRAFSH  540
SDILNITGLN NCMNTSQEQP NQSQKTWQG
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1117129KLKQRASKEVRKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G55110.11e-114C2H2 family protein