PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022724442.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

TCP

Protein Properties

Length: 472aa MW: 51025.7 Da PI: 7.6046

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022724442.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	118.8	6.5e-37	86	244	2	133
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt.......................ssssasec 73 g+kdrhsk+ T++g+RdRRvRls+++a++f+dLqd+LG+d++sk++eWL+++a ai el+++ + +sa e+ XP_022724442.1 86 SGGKDRHSKVWTSKGLRDRRVRLSVTTAIQFYDLQDRLGYDQPSKAVEWLIKAAADAIAELPSLnspfpdtpkqlsdekrasegteqGLDSA-EV 179 689***********************************************************7777766666665555444433322222.22 PP TCP 74 .eaesssssasnsssgkaaksaakskksqksaasalnlak....esrakarararertrekmrik 133 +++ s+ ++n+s++ + +++a+s+ s++s++s l+l++ r kar+rarer ++++ ++ XP_022724442.1 180 gLDGDPSNYQQNQSQHLSLSKSACSSTSDTSKNSGLSLSRseirVNRVKARERARERAAKEKEKE 244 455555555556666677777777778888888788887753335569******666555544 PP

Sequence ? help Back to Top
Protein Sequence Length: 472 aa Download sequence
MEVDETQTQA CKFSRVGNGG NDSSKIDQKG SDSYPNDEED GELNKRAGAN GGGGGGIGAV 60 GAHSAGTNRL RGWHHSSRII RVSRASGGKD RHSKVWTSKG LRDRRVRLSV TTAIQFYDLQ 120 DRLGYDQPSK AVEWLIKAAA DAIAELPSLN SPFPDTPKQL SDEKRASEGT EQGLDSAEVG 180 LDGDPSNYQQ NQSQHLSLSK SACSSTSDTS KNSGLSLSRS EIRVNRVKAR ERARERAAKE 240 KEKEQESGTA HHQNMNRISQ NSSFTELLTG GIGSVSNDNT SPTASAHQNS NGDHDFFHKA 300 NTARQWPVTQ MDYFTMGLLG PPPSSRSIHS SGFPGQIQLG NSLPQTISIT PFNVSGENHQ 360 ELQHFSFVPT PDHLIPVATT QPGPGSDYNL NFTISSGLAG FNRGTLQSNS PSFLPHHLQR 420 FSSIDGSSPF YIGTPPVENH HHHQFPAGLD GRLQLCYGDG SRSSDQKGKG KN

Sequence ? help Back to Top

Protein Sequence Length: 472 aa Download sequence

MEVDETQTQA CKFSRVGNGG NDSSKIDQKG SDSYPNDEED GELNKRAGAN GGGGGGIGAV  60
GAHSAGTNRL RGWHHSSRII RVSRASGGKD RHSKVWTSKG LRDRRVRLSV TTAIQFYDLQ  120
DRLGYDQPSK AVEWLIKAAA DAIAELPSLN SPFPDTPKQL SDEKRASEGT EQGLDSAEVG  180
LDGDPSNYQQ NQSQHLSLSK SACSSTSDTS KNSGLSLSRS EIRVNRVKAR ERARERAAKE  240
KEKEQESGTA HHQNMNRISQ NSSFTELLTG GIGSVSNDNT SPTASAHQNS NGDHDFFHKA  300
NTARQWPVTQ MDYFTMGLLG PPPSSRSIHS SGFPGQIQLG NSLPQTISIT PFNVSGENHQ  360
ELQHFSFVPT PDHLIPVATT QPGPGSDYNL NFTISSGLAG FNRGTLQSNS PSFLPHHLQR  420
FSSIDGSSPF YIGTPPVENH HHHQFPAGLD GRLQLCYGDG SRSSDQKGKG KN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G18390.1	1e-59	TCP family protein