PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022724357.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

C2H2

Protein Properties

Length: 647aa MW: 72837.3 Da PI: 7.0404

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022724357.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	14.8	8.3e-05	77	98	2	23
EETTTTEEESSHHHHHHHHHHT CS zf-C2H2 2 kCpdCgksFsrksnLkrHirtH 23 kC +C++ F ++ n++rHir+H XP_022724357.1 77 KCDKCSREFCSPINYRRHIRVH 98 7********************6 PP

Sequence ? help Back to Top
Protein Sequence Length: 647 aa Download sequence
MPVAKLKAGN SAHVMKSEEP NDSLDTFIRQ AIGKESFLSF SRAGDNPVQW IQLLHALDQQ 60 DIPGWPLLTP LKVQMQKCDK CSREFCSPIN YRRHIRVHHR LKKLDKDSAK NRDLLAAFWD 120 KLSEDEAKEV ISFKDVSLED LVQARPSRFP VSSQELFSIL DDASERTFLF GVAVSIQKYI 180 FDGEAGKIGL ETKNLVACTS FLVEQKLVKA WLADKDAEAL RCQKLLVEEE EAAQKRQVEL 240 LERKKQKKLR QKEQKAKEQR QWEVEEDKQN NDDSLEVNIP AETSSTLAAF DSDGQNPVIS 300 TYQVLPSVEP IHISKPEEDV DYEIQMGFSN GYCDSGTSQN VESRMEQVGG HQRIVVTRWQ 360 TPPKSHKGVL NDFHASQNSH RLKFGGMNKH GTKRERVAAM GNSNKMWSRK SKAVYDGKSL 420 RIREEKQTTN QLDQNKNHEV LIGSISVMLG NCSYLEVNNL AEACHRCLAE CQIPKKNNVQ 480 EKFSQLDPVQ GVTNRSTIKF WRPVSQREGQ SSLPVQNGVK EFEVEVIAEK DGVQTFDESC 540 LRLYATDRND GVVSTNLSST LEESVQPGSL QFDSHVAKAF LARRWKEAIA GGHVTLVLSP 600 NLEPPGCSEV ENDSSEKWMD KAGAFEASTG GAAKGKFRTM PEKVAKM

Sequence ? help Back to Top

Protein Sequence Length: 647 aa Download sequence

MPVAKLKAGN SAHVMKSEEP NDSLDTFIRQ AIGKESFLSF SRAGDNPVQW IQLLHALDQQ  60
DIPGWPLLTP LKVQMQKCDK CSREFCSPIN YRRHIRVHHR LKKLDKDSAK NRDLLAAFWD  120
KLSEDEAKEV ISFKDVSLED LVQARPSRFP VSSQELFSIL DDASERTFLF GVAVSIQKYI  180
FDGEAGKIGL ETKNLVACTS FLVEQKLVKA WLADKDAEAL RCQKLLVEEE EAAQKRQVEL  240
LERKKQKKLR QKEQKAKEQR QWEVEEDKQN NDDSLEVNIP AETSSTLAAF DSDGQNPVIS  300
TYQVLPSVEP IHISKPEEDV DYEIQMGFSN GYCDSGTSQN VESRMEQVGG HQRIVVTRWQ  360
TPPKSHKGVL NDFHASQNSH RLKFGGMNKH GTKRERVAAM GNSNKMWSRK SKAVYDGKSL  420
RIREEKQTTN QLDQNKNHEV LIGSISVMLG NCSYLEVNNL AEACHRCLAE CQIPKKNNVQ  480
EKFSQLDPVQ GVTNRSTIKF WRPVSQREGQ SSLPVQNGVK EFEVEVIAEK DGVQTFDESC  540
LRLYATDRND GVVSTNLSST LEESVQPGSL QFDSHVAKAF LARRWKEAIA GGHVTLVLSP  600
NLEPPGCSEV ENDSSEKWMD KAGAFEASTG GAAKGKFRTM PEKVAKM

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	242	249	ERKKQKKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G25610.1	1e-127	C2H2 family protein