PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022724340.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

C2H2

Protein Properties

Length: 682aa MW: 76384.6 Da PI: 7.516

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022724340.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	14.7	8.8e-05	77	98	2	23
EETTTTEEESSHHHHHHHHHHT CS zf-C2H2 2 kCpdCgksFsrksnLkrHirtH 23 kC +C++ F ++ n++rHir+H XP_022724340.1 77 KCDKCSREFCSPINYRRHIRVH 98 7********************6 PP

Sequence ? help Back to Top
Protein Sequence Length: 682 aa Download sequence
MPVAKLKAGN SAHVMKSEEP NDSLDTFIRQ AIGKESFLSF SRAGDNPVQW IQLLHALDQQ 60 DIPGWPLLTP LKVQMQKCDK CSREFCSPIN YRRHIRVHHR LKKLDKDSAK NRDLLAAFWD 120 KLSEDEAKEV ISFKDVSLEE VPGSSVIKSL TALLKRPGFS ALPLVCLRAG SALLDLVQAR 180 PSRFPVSSQE LFSILDDASE RTFLFGVAVS IQKYIFDGEA GKIGLETKNL VACTSFLVEQ 240 KLVKAWLADK DAEALRCQKL LVEEEEAAQK RQVELLERKK QKKLRQKEQK AKEQRQWEVE 300 EDKQNNDDSL EVNIPAETSS TLAAFDSDGQ NPVISTYQVL PSVEPIHISK PEEDVDYEIQ 360 MGFSNGYCDS GTSQNVESRM EQVGGHQRIV VTRWQTPPKS HKGVLNDFHA SQNSHRLKFG 420 GMNKHGTKRE RVAAMGNSNK MWSRKSKAVY DGKSLRIREE KQTTNQLDQN KNHEVLIGSI 480 SVMLGNCSYL EVNNLAEACH RCLAECQIPK KNNVQEKFSQ LDPVQGVTNR STIKFWRPVS 540 QREGQSSLPV QNGVKEFEVE VIAEKDGVQT FDESCLRLYA TDRNDGVVST NLSSTLEESV 600 QPGSLQFDSH VAKAFLARRW KEAIAGGHVT LVLSPNLEPP GCSEVENDSS EKWMDKAGAF 660 EASTGGAAKG KFRTMPEKVA KM

Sequence ? help Back to Top

Protein Sequence Length: 682 aa Download sequence

MPVAKLKAGN SAHVMKSEEP NDSLDTFIRQ AIGKESFLSF SRAGDNPVQW IQLLHALDQQ  60
DIPGWPLLTP LKVQMQKCDK CSREFCSPIN YRRHIRVHHR LKKLDKDSAK NRDLLAAFWD  120
KLSEDEAKEV ISFKDVSLEE VPGSSVIKSL TALLKRPGFS ALPLVCLRAG SALLDLVQAR  180
PSRFPVSSQE LFSILDDASE RTFLFGVAVS IQKYIFDGEA GKIGLETKNL VACTSFLVEQ  240
KLVKAWLADK DAEALRCQKL LVEEEEAAQK RQVELLERKK QKKLRQKEQK AKEQRQWEVE  300
EDKQNNDDSL EVNIPAETSS TLAAFDSDGQ NPVISTYQVL PSVEPIHISK PEEDVDYEIQ  360
MGFSNGYCDS GTSQNVESRM EQVGGHQRIV VTRWQTPPKS HKGVLNDFHA SQNSHRLKFG  420
GMNKHGTKRE RVAAMGNSNK MWSRKSKAVY DGKSLRIREE KQTTNQLDQN KNHEVLIGSI  480
SVMLGNCSYL EVNNLAEACH RCLAECQIPK KNNVQEKFSQ LDPVQGVTNR STIKFWRPVS  540
QREGQSSLPV QNGVKEFEVE VIAEKDGVQT FDESCLRLYA TDRNDGVVST NLSSTLEESV  600
QPGSLQFDSH VAKAFLARRW KEAIAGGHVT LVLSPNLEPP GCSEVENDSS EKWMDKAGAF  660
EASTGGAAKG KFRTMPEKVA KM

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	277	284	ERKKQKKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G25610.1	1e-149	C2H2 family protein