PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022724323.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
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Family | Dof | ||||||||
Protein Properties | Length: 328aa MW: 35684.2 Da PI: 9.6759 | ||||||||
Description | Dof family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-Dof | 120.5 | 6.2e-38 | 45 | 104 | 3 | 62 |
zf-Dof 3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 + ++kcprC+s ntkfCyynnyslsqPryfCk+CrryWt+GG+lrnvPvGgg+rk k+++ XP_022724323.1 45 HPTQKCPRCESLNTKFCYYNNYSLSQPRYFCKTCRRYWTQGGTLRNVPVGGGCRKGKRTK 104 66789**************************************************99875 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 328 aa Download sequence |
MQQDRGGGGS DQDMKQHQQQ DRRLMKPLTG ENQQPPPPLQ QQQPHPTQKC PRCESLNTKF 60 CYYNNYSLSQ PRYFCKTCRR YWTQGGTLRN VPVGGGCRKG KRTKASSSGE NSSFQPQIPQ 120 QQAQQQNLTS PQSMISSNPM IISASSALRT KESDSLASSS AISSVGSYYP GGGFLSSLAA 180 IQSMNQPQPF NQPLNQALSI GGGDLGGSSN LGLLQGYVVP SFGSQQHQPI QQTHFFQMFN 240 REKTVNMYPS TQEGLIQSSR SAAGNSSQQS WHQSFINNSN PTVSEATLWS INNNSSTSTA 300 GNTNTSNTTG SSSLNPNQWP DRPGYGAP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G60200.1 | 5e-30 | Dof family protein |