PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022724316.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

bHLH

Protein Properties

Length: 466aa MW: 50967.8 Da PI: 4.8318

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022724316.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	24.6	4.5e-08	381	421	9	54
HHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 9 ErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 r+RR+ri +++ L++l+P K++ a++L +A +Y+k L XP_022724316.1 381 ARQRRERISERITVLQRLVPGG-----SKMDTASMLDEAANYLKFL 421 69****************95.....5**************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 466 aa Download sequence
MDGLGWNGSE VVGNSMLAWN SQRNDIENSF LIFNSNSSMY GGKMDLPEDI FNPIQELQKA 60 QPSRVNPDSD ILSEMIPQSV SELDLVNVAS NFNMLQRQAV RFAADTSLME STNWGDAFTQ 120 ELCSSPLMNS AYGLSTSNAS ISDIGMAVHS QVINGLRNGK AGATTTGSLE SLDCFLSATN 180 SNSDTSVEDD GISMIFSDCT NIWNFAASSA VSSGESENNG SNTGSKDFKC PMNELDETVS 240 QSSSDRYINN GKLSQTQTQP ICSKRGNDDQ FKVGLNCSYI NLLQTDSSAT EGGFRLIPEN 300 PPKTKKARSE KRPSSSNINF QQPSSSVSSS IEEPDSEAIA QMKEMIYRAA AFRPVNLGLE 360 VVEKPKRKNV RLSTDPQTVA ARQRRERISE RITVLQRLVP GGSKMDTASM LDEAANYLKF 420 LRSQVKALEN LGHKLDPMSC PPTDLLSHLY HPIPTTLSQC KQIFHS

Sequence ? help Back to Top

Protein Sequence Length: 466 aa Download sequence

MDGLGWNGSE VVGNSMLAWN SQRNDIENSF LIFNSNSSMY GGKMDLPEDI FNPIQELQKA  60
QPSRVNPDSD ILSEMIPQSV SELDLVNVAS NFNMLQRQAV RFAADTSLME STNWGDAFTQ  120
ELCSSPLMNS AYGLSTSNAS ISDIGMAVHS QVINGLRNGK AGATTTGSLE SLDCFLSATN  180
SNSDTSVEDD GISMIFSDCT NIWNFAASSA VSSGESENNG SNTGSKDFKC PMNELDETVS  240
QSSSDRYINN GKLSQTQTQP ICSKRGNDDQ FKVGLNCSYI NLLQTDSSAT EGGFRLIPEN  300
PPKTKKARSE KRPSSSNINF QQPSSSVSSS IEEPDSEAIA QMKEMIYRAA AFRPVNLGLE  360
VVEKPKRKNV RLSTDPQTVA ARQRRERISE RITVLQRLVP GGSKMDTASM LDEAANYLKF  420
LRSQVKALEN LGHKLDPMSC PPTDLLSHLY HPIPTTLSQC KQIFHS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	382	387	RQRRER

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G21330.1	5e-76	bHLH family protein