PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022724291.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
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Family | AP2 | ||||||||
Protein Properties | Length: 581aa MW: 64314.4 Da PI: 6.8255 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 49 | 1.6e-15 | 258 | 317 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.pse.ng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++gr++A+++d + g ++ ++++lg ++ +e+Aa+a++ a++k++g XP_022724291.1 258 SQYRGVTRHRWTGRYEAHLWDnSCRkEGqtRKgRQVYLGGYDKEEKAARAYDLAALKYWG 317 78*******************655454478446*************************98 PP | |||||||
2 | AP2 | 48.4 | 2.3e-15 | 360 | 411 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s y+GV+++++ grW A+I + +k +lg+f t eeAa+a++ a+ k++g XP_022724291.1 360 SVYRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFTTQEEAAEAYDIAAIKFRG 411 78****************988532...5************************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 581 aa Download sequence |
MSNWLGFSLT PHLRIDESFG RQDHGGFSSV MPLRSDGSLC VVDPFRRSSN GAEDWRYENG 60 IRSANEEGPK LEDFLGCCYS NSPSEETKAY CQTQEDQNQN SISARINVNV APSYNGNGDM 120 ETGENFTNPS SLIQTYHFNG NPQTLMASDH NLQQCDPNPN HNQNNGMYHV PFESAASVSG 180 FKSWLRETPF SGGRTSGEAS NNCNFQSLSL TMSPSSQNGL VAIAPLELVE NRKRPVGRTL 240 AREPVPRKSI DTFGQRTSQY RGVTRHRWTG RYEAHLWDNS CRKEGQTRKG RQVYLGGYDK 300 EEKAARAYDL AALKYWGPTT HINFPLITYE KELEEMKNMT RQEFVAHLRR KSSGFSRGAS 360 VYRGVTRHHQ HGRWQARIGR VAGNKDLYLG TFTTQEEAAE AYDIAAIKFR GTSAVTNFDI 420 SRYDVKRICS SSTLIGGDLA KRSPKESASI ALEDYNSCNS STAAQPLLAI SSGEASDELA 480 GMVWSANSDD QQQHQSNNTN NDASLATSNS RNSSNPQSPK CSVGLASDQF GIGGDHSQGQ 540 GYLLQSPKYE DGNNGTENSN ENRLGNVGLV HQVPIFALWN E |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G72570.1 | 1e-139 | AP2 family protein |