PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022724245.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
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Family | NAC | ||||||||
Protein Properties | Length: 346aa MW: 38626.4 Da PI: 10.1012 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 177.1 | 4.9e-55 | 15 | 142 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 lppGfrFhPtdeelvv+yLk+kv++ +l++ ++i+evd+yk++Pw+Lp+k++ +e+ewyfFs+rd+ky++g r+nra++sgyWkatg+dk+++++ XP_022724245.1 15 LPPGFRFHPTDEELVVHYLKRKVASAPLPV-TIIAEVDLYKFDPWELPSKATFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPIVTS 108 79****************************.89***************8888999*************************************998 PP NAM 96 .kgelvglkktLvfykgrapkgektdWvmheyrl 128 ++++vg+kk Lvfy+g+ pkg kt+W+mheyrl XP_022724245.1 109 nGNQKVGVKKALVFYRGKPPKGIKTNWIMHEYRL 142 67788***************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 346 aa Download sequence |
MESTDSSSAS PHPQLPPGFR FHPTDEELVV HYLKRKVASA PLPVTIIAEV DLYKFDPWEL 60 PSKATFGEQE WYFFSPRDRK YPNGARPNRA ATSGYWKATG TDKPIVTSNG NQKVGVKKAL 120 VFYRGKPPKG IKTNWIMHEY RLVNNNSTSK PLIVDVHNRK VSLRLDDWVL CRIYKKNNTQ 180 RRTERGKDYT MEGVQATLPT SSHQNPRLPT SKATSYGSTL EHEENFFEGI LKGEGMQNSS 240 ISQIAASSSS KQNLSMALAA STTNSGLVKR ALPPQNWIQP NSIESQSCKR FQGDLNSSNT 300 AGIDDTNSFV SFLNHLPQNA PFHPGTLVGS LGDRQKFILA SLNWNS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G15510.1 | 1e-105 | NAC family protein |