PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022724218.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
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Family | Dof | ||||||||
Protein Properties | Length: 162aa MW: 18316.8 Da PI: 8.8943 | ||||||||
Description | Dof family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-Dof | 123.3 | 8e-39 | 42 | 100 | 2 | 60 |
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkk 60 ++k+++cprC+s +tkfCy+nny+++qPr+fCk+C+ryWt+GGalrnvPvG+grrk k XP_022724218.1 42 PDKIIPCPRCKSVETKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKAKP 100 68999***************************************************985 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 162 aa Download sequence |
MVMASQEAGQ GIKLFGTTIT FHGRQVKEEH NKADHPTVDK RPDKIIPCPR CKSVETKFCY 60 FNNYNVNQPR HFCKGCQRYW TAGGALRNVP VGAGRRKAKP PDRGLGGFPE GCLYDGSSGL 120 HQFELEEMVL DEWHVAAANG GFRQVFPMKR RRISCSEEME NQ |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 149 | 153 | KRRRI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G29160.1 | 7e-62 | Dof family protein |